Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0658 |
Symbol | |
ID | 5132008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 647241 |
End bp | 648413 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529564 |
Product | pyruvate ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_001214121 |
Protein GI | 147669303 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.224436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAGAG TAGGCTTAGA AGTTTCTATT GCCCTGAGTG AGGCAGTTGG GCTTTGCAAT GCTGATGTTA TTGCCGCTTA TCCCATTACT CCTCAAACTC ATATTGTTGA ACATTTGGCC GAGATGGTGG CTGAAGGCGA GCTGGATGCT GAATATATAC CGGTGGAATC TGAACATTCA GCCCTGAGTG CCTGTTTGGG CTCGGCGGCA GCCGGTGCCC GCACTTTTAC CGCAACTGCC GGGCAAGGGC TTGAGCTTAT GCACGAGGTG CTTTATGTGG CTTCCTCTAT GCGGCTGCCT ATTATGATGG CAGTTGCCAA TAGGGCTCTT TCCGGTCCGC TTTCAGTTTG GGGTGACCAC TCTGACGTAA TGTCCTGCCG TGATATCGGC TGGATACAAA TATTTACTGA AAACGGGCAG GAAGTGGTTG ATAACACTAT CTGTTCCTTT AAAATAGGCG AAGACAAACG GGTGCTCTTA CCTGTTATGG TTCACTTGGA CGGTTTTCAT CTTTCTCATG TTATTGAGCC TATTGAGATG CCTGAGAGAA AGCAGGTAGA TGCTTTCCTT AGTGTTAACG ACTATCCGTA TGCACTAAAC CCTGATAATC CCCGTGCTAT GGGTGATTTT GCCCCCCCGG TGATTTTCAC CGAAGCCAAG TGGGCACAGG AACAGGATTT TCAAAAATCC AAAGCTGTTA TTTTGGAAGT CTGGAAGGAC TTTGAGAAGC AGTTTGGCCG TTCTTACAAA CCGGTGGAAA CCTATCGCAC CGAAGGTGCT GAAAACCTGC TGTTCACTAT GGGCAGTTTT TCAGAGACTG CCATGTCCGC CATTGATAAA ATGCGTGATG ACGGCATGAG TGTGGGGCTG GTTCGGCTTC GGCTTTGGCG CCCCTTCCCC TTTGAGGAGT TGCGCACTGC TGTCAAAGAT GCCAAAAACC TCATCGTGCT TGATCGTGCC TTGTCAATAG GTGGTCCGGG TGGTCCGGTC TGTTCCGAAA TCAAGGCCGC TCTATATCCT CTGGAGAAAA AACCCAAGAT TGTCAGCATT ATCGGCGGTT TGGGCGGACG GGATATAACC GTTGCCAATT TTGAGGATAT CATGAAGAAA GGTCTGGCGA TTGCTGAAAA AGGCAGTCCT AGCGAATACG AAATATATGG AGTGAGGGCA TAA
|
Protein sequence | MPRVGLEVSI ALSEAVGLCN ADVIAAYPIT PQTHIVEHLA EMVAEGELDA EYIPVESEHS ALSACLGSAA AGARTFTATA GQGLELMHEV LYVASSMRLP IMMAVANRAL SGPLSVWGDH SDVMSCRDIG WIQIFTENGQ EVVDNTICSF KIGEDKRVLL PVMVHLDGFH LSHVIEPIEM PERKQVDAFL SVNDYPYALN PDNPRAMGDF APPVIFTEAK WAQEQDFQKS KAVILEVWKD FEKQFGRSYK PVETYRTEGA ENLLFTMGSF SETAMSAIDK MRDDGMSVGL VRLRLWRPFP FEELRTAVKD AKNLIVLDRA LSIGGPGGPV CSEIKAALYP LEKKPKIVSI IGGLGGRDIT VANFEDIMKK GLAIAEKGSP SEYEIYGVRA
|
| |