| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0626 |
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| Symbol | |
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| ID | 5131269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 614688 |
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| End bp | 615746 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529529 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001214089 |
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| Protein GI | 147669271 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00167875 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTAT TAAACGCAAC ACTTGCAAAG ATATACGGGC TGGATAAAGA AGCCATGGTC
AAGGCTCAGG CACATCAGGA TATCCTGATC AAACCACAGG GTTCTCTGGG CAAACTGGAA
GCTATTGTGG TGCAACTGGC AGGTATTCAG GGTGATGCCA AACCAAAAAC CGCCAAAAAA
GCCATTATAA CCATGGCTGG TGACCACGGC ATTATTGACG AAAAGTTTCA CAACTGGCCG
AAAGAAGTAA CTGTCCAGAT GCTGCAAAAT TTTGCTCATG GCGGTGCAGC CATAAACGTC
CTTTCCCGGC AGGTAGGGGC GCGTAACGTG GTAGTTGCGT TAGGTGTGGC TACTCCCATG
GCTGCAGACC CGAATATAAT TAACCGGAAT ATTGCACCCG GTACCAACAA TATGGTTCAT
GGCCCGGCTA TGACCCGTGA ACAGGCTGTA AAGGCTATTG AGGTGGGCAT AGAGATTGTA
AACGCCGAGG TCAAGAAGGG GCTGGATTTG GTAGGTACCG GTGATATGGG TATTGGCAAT
ACTTCTCCGT CTGCTGCTAT CTGCTCTGTT ATTACCGGGC GGTCACTTGA AGATGTAACC
GGGCGCGGTA CAGGTGCTTC TGATGAGCAG ATGAAGCTGA AACGCAACGC TATTGCCAAA
GCTATTTCCC TGAATAACCC TGATGCTAAA GATGCGATTG ATGTATTATC TAAAGTGGGC
GGCTATGAAA TTGGCGGTCT GGCAGGAGTA ATACTGGGTG CGGCGGCTAA TAGAGTGGCG
GTGGTTGTAG ACGGCTTTAT CTCCGGTGCG GCGGCTCTTA TTGCTTATAC CATCTGCCCG
CAGGTAAAAG ACTTCATGTT TGCCGCTCAC CAGTCAGTAG AGCCCGGACA CCGTATCCTG
CTTGAGCATA TGGGGCTAGA TGCTATTTTG AAAATGGATA TGCGTCTGGG TGAAGGAACG
GGTGCGGCTC TTGCCATGAA TATTATAGAA GCAGCTAACC GTATCCAGCA CGAGATGGCC
TCCTTTGCAG ATGCAGGGGT TTCCGAAAAG CAAAGTTAG
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| Protein sequence | MELLNATLAK IYGLDKEAMV KAQAHQDILI KPQGSLGKLE AIVVQLAGIQ GDAKPKTAKK
AIITMAGDHG IIDEKFHNWP KEVTVQMLQN FAHGGAAINV LSRQVGARNV VVALGVATPM
AADPNIINRN IAPGTNNMVH GPAMTREQAV KAIEVGIEIV NAEVKKGLDL VGTGDMGIGN
TSPSAAICSV ITGRSLEDVT GRGTGASDEQ MKLKRNAIAK AISLNNPDAK DAIDVLSKVG
GYEIGGLAGV ILGAAANRVA VVVDGFISGA AALIAYTICP QVKDFMFAAH QSVEPGHRIL
LEHMGLDAIL KMDMRLGEGT GAALAMNIIE AANRIQHEMA SFADAGVSEK QS
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