Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0559 |
Symbol | |
ID | 5132350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 544047 |
End bp | 545759 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529462 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001214022 |
Protein GI | 147669204 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.42957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGATA TGACCTGTCA GGTATTTTAC CGCAAATGGC GTCCCCAAAC TCTGGCTGAC CTTGTCGGCC AGGAACACGT TGCCCACACT CTGAAAAACG CCCTTTCAAG CGGGCGTATT GCTCAGGCGT ACCTTTTTTG CGGCCCCAGA GGTACAGGCA AGACCAGTAC CGGACGTATT TTAGCCAAGG CAGTAAACTG CACCACCAAT CAGGGCAAGG GTGAACCCTG CAATACCTGC CCCATGTGCC TTTCCATAAC CGAGGGCAGT TCCATGGATA TAATAGAAAT AGACGCCGCC TCCAATACCG GAGTAGACGA TATCCGCGAA CTAAAAGAAA AGGTTCAGTA TTCCCCATCA CTGGCAAATT ACAAAGTTTA TATCATAGAT GAAGTCCATA TGCTTTCCAA CAGTGCCTCA AACGCACTCC TGAAAACGCT TGAAGAACCA CCGCCAAGGG TTATATTTAT ACTTGCCACT ACTGAAATCC ACAAGGTTTT GCCCACCATC ATGTCCCGCT GCCAGCGGTT TGATTTTCAC CGGGTATCTC TGGTGGATAT GACCCGCAAG CTGGGCAAGA TAAGTCTGGC AGAGGGTATA AATGTTGAGC CGGAGGCCTT GAAACTGATA GCCCGTTCGG CTGGAGGCAG TTTCCGTGAC GGTGAAAACC TGCTCCAGCA GATAGCCACC ACTTACGGAG CAGAAATAAG CCTGTCCCAG GTACAGGCGG CTCTGGGTAT CAGCGGAGAT GAACGCATAA AAGCTCTGGC AGAAAATATA CTTAAAAAAG ACATTAAAAA CGGGCTTAAA ACCCTTAACG CTGTATTGGC AGACGGGCTT GATTTAAAAC AGTTCCGCCG TGAACTGCTG GATTACCTCC GCCAGATTAT GCTGGTAAAC AGCGGATCGG AAAGCAGTCT GGAACTGACC GCTGATGAGA AAAAAGCCCT GCAAAAAGTC TCCGGTATAA CCAATCTGGA GAATATTACC AAAGCTATAA AGGCCTTCAG CCAGCTGGAT TTTTCATCCG ATACGGCTTC CAGCCTGAGC TTTGAGCTGG CACTGATAGA CGCTTCTCTG GATAAAAATA CCGTACCGCT TCCAAATAAA CCCAAAGACG AAATACCGGC TGTTAAAGCT GATAAACCTG CTCCGTTAGA AGCACCCAAG ACAGCAGCAT CTAATAATAT ACCCACCAAA GAACCCAAAA CAGAAACCTT AACTAAACCG AATACATCTG CAGAAACCGC AGCTACTCCC AAGCCTCACA CTAAGGAATC TGCACCCAAA CTTACCAGAG CGGCTATTCC GATTGAGGAA AAACCCAAAT ACACCGCCCC TGCCCCGCCC AAAGAGGAAG AAAAAGTGCT TATTGGAGCT GGGGATATAA TAGAACAGCT TAAAGTCAGC TGGAAAAGCA TACTGGACCA AGCACCGGAC AATCTAAAAC GGTCAGCGGC AGTGGCCATA CTCCGCAGTG CCGGTGTCCG CCCGGTTTCT ATGGATAAAA ATATAGTCAC CCTGTCCTTT AAATACAAGT ACCACAAGGA CAAGATTGAA GAACTGGAAA ACCGTAAGGT GACTGCAGAA CTTATTTCAA ATTTTGTAGG CAAGACATGC ACCCTGGTAT GCATATCTGA AGCCGAAACC AACCATTTGG TAAAACAAGC TCAGAAACTG GGCGCCCAGA TTATATCAGT GGAGGAAAAG TAA
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Protein sequence | MADMTCQVFY RKWRPQTLAD LVGQEHVAHT LKNALSSGRI AQAYLFCGPR GTGKTSTGRI LAKAVNCTTN QGKGEPCNTC PMCLSITEGS SMDIIEIDAA SNTGVDDIRE LKEKVQYSPS LANYKVYIID EVHMLSNSAS NALLKTLEEP PPRVIFILAT TEIHKVLPTI MSRCQRFDFH RVSLVDMTRK LGKISLAEGI NVEPEALKLI ARSAGGSFRD GENLLQQIAT TYGAEISLSQ VQAALGISGD ERIKALAENI LKKDIKNGLK TLNAVLADGL DLKQFRRELL DYLRQIMLVN SGSESSLELT ADEKKALQKV SGITNLENIT KAIKAFSQLD FSSDTASSLS FELALIDASL DKNTVPLPNK PKDEIPAVKA DKPAPLEAPK TAASNNIPTK EPKTETLTKP NTSAETAATP KPHTKESAPK LTRAAIPIEE KPKYTAPAPP KEEEKVLIGA GDIIEQLKVS WKSILDQAPD NLKRSAAVAI LRSAGVRPVS MDKNIVTLSF KYKYHKDKIE ELENRKVTAE LISNFVGKTC TLVCISEAET NHLVKQAQKL GAQIISVEEK
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