Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0547 |
Symbol | |
ID | 5132130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 533451 |
End bp | 535046 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529449 |
Product | extracellular solute-binding protein |
Protein accession | YP_001214010 |
Protein GI | 147669192 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA AAATACTGCT TATAATCCTT TCGGTCTGTC TCAGTTTCAG TTTGCTTCTA AGCGGCTGTG GCTATGCACC GGAAGATAAC ACTATGCCCA CAGGTAACAA CGTCCTTACA CTGGTGGGGC AGGAACCATA TACCCTTGAC CCTGCCAAGG TAAGTGACAG CGGTTCGGTT ACCTATATTT ATCAGATATT CAGCGGGTTG TTGAAAATGG GTGATGATCT TACTCCTGTT GCGGATATTG CACAGAGTTG GGAAGTAAGC CCTGACGGGC TTACCTATAC ATTTTATTTA AAACCAAATG TGAAATTTCA TAACGGCCGT GTCTTGACTG CTGCAGATTT TAAATACTCT TGGGAGAGGG CAGCCAGCCC GGCCACTGCC TCTAATACGG TGCTGACCTT TCTTGGGGAT ATTCAGGGCG TAACCGAAAT GGTGCAGGGA CAGGCAAACT CCATTTCGGG TGTGACTGTG GTAGATGACC TGACTTTAAA AGTAAAACTG GTATCCCCCT GCAGTTTCTT CCTCTCAAAA ATTTCATATG TAACTGCTTT CGTGGTGGAC AAGGATAATG TATCCCAAGG TAGTGACTGG TGGAAAAAAC CGGTAGGTAC CGGCCCGTTT ATGCTCCCGG AACTTACCCA GGGGAATTAT ATTATGCTAA ACAGCAACCC TGACTATTAT GATACCCCGG CCAAGATTTC CAGTGTTATT TTCCGTCTCC AGTCCGGCCA ACCCATGGAT TTATATGAAG TGGGCGGGAT AGATGTGGCA GGTGTCAGTG CTGATTATCT GGCCAAAGCC ACTGACCCTG ACGGGTTTTT TTCAGCTGAT TTGCAGGTGG TGCCTCAACT TAGTTTTTAC TATTTTGCCT ATGTTACCAG TAAAGCCCCC TTTGACGACC CCAAGATTCG TCAGGCTTTC AGCATGGCGG TAGACAAAGC CCGTATTATA GAGCTAAGCT ACAAGGGAAG TGTCAGCGTG GCTGAAGGCA TTTTGCCGCC GGGTATGCCC GGTTACAATC CTGACCTGTC CGGGCTTGAG TATAATCCTG AACGTGCCCG TGAACTTATT GCGGAGTCTT CCTATGGCAG TGTGGAAAAC CTGCCCACTA TTACCCTGAC AGCCTCAGGC TGGGGAGGGT TGCTTCCGGT GGAACTGGAA GCGGTGATTG ACCAGTGGAG GCAAAATCTG GGGGTAGAAG TGGTGGTACG CCAGATAGAT ATGGAACGTT TCCTTTATGA CCTTCAGACT GAAAAAGACA ACCTCTACTA TTCCGGCTGG GTGGCAGATT ACCCCCACCC GCAGGATTTT CTGTCAGTGC TTTTTGAGAC CACTTCATCT TACAACAGCG GAGATTACTC TAACCCTGAG GTAGACGCAC TGCTTGTGCA GGCGGCTGCC ACTCTGGATA CGGAAGAAAG TATGCAGCTT TATGCTCAGG CAGAACAAAT ACTGATAAAT GATGCTGCTT GCCTGAGCTT TTGGTTTGGC AAGAATTACA TGTTAGTCAA ACCCTATGTA AAGGGCTACA AGCTGAATGC AATGGGTATC CCCATACTTA CGGAAGTTAG CCTTGAAGCT CACTAA
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Protein sequence | MMKKILLIIL SVCLSFSLLL SGCGYAPEDN TMPTGNNVLT LVGQEPYTLD PAKVSDSGSV TYIYQIFSGL LKMGDDLTPV ADIAQSWEVS PDGLTYTFYL KPNVKFHNGR VLTAADFKYS WERAASPATA SNTVLTFLGD IQGVTEMVQG QANSISGVTV VDDLTLKVKL VSPCSFFLSK ISYVTAFVVD KDNVSQGSDW WKKPVGTGPF MLPELTQGNY IMLNSNPDYY DTPAKISSVI FRLQSGQPMD LYEVGGIDVA GVSADYLAKA TDPDGFFSAD LQVVPQLSFY YFAYVTSKAP FDDPKIRQAF SMAVDKARII ELSYKGSVSV AEGILPPGMP GYNPDLSGLE YNPERARELI AESSYGSVEN LPTITLTASG WGGLLPVELE AVIDQWRQNL GVEVVVRQID MERFLYDLQT EKDNLYYSGW VADYPHPQDF LSVLFETTSS YNSGDYSNPE VDALLVQAAA TLDTEESMQL YAQAEQILIN DAACLSFWFG KNYMLVKPYV KGYKLNAMGI PILTEVSLEA H
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