Gene DehaBAV1_0539 details

Gene Information

• Locus tag: DehaBAV1_0539
• Symbol: atpC
• ID: 5131568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 527966
• End bp: 528388
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640529441
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001214002
• Protein GI: 147669184
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000746068
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTAAAT TAAAGCTGGA CATAGTAACT GCGGAACGTT CGGTTTTTTC CGAAGAGGTA 
GATGTGGTGG TTGCCCCCGG TATTGAGGGT GAAATGGCCA TACTACCCCA TCATGCCCCG 
CTGATGACAG CTTTGCAGGC GGGGGAACTC AAGGCCAAAA TAGGCACAGA GGAATATTCT 
CTGGTAGTTT CCGGTGGTTT CCTTGAGGTA CGTCCTGACA GAGTAGTTGT ACTGGCAGAT 
AGTGCCGAAA GGGCTGAGGA GATTGACATT GCCCGGGCTA TCGAAGCTAA GAAAAGGGCT 
GAGGCCAGTA TGGCTGACAA ATATGTGCCC GGTATGCTGG CTGCCGAAAC AGAGGCTTCA 
CTCAGACGGG CGATGGTTCG TCTGAAGGTG GCCGAGAAAC GGCGGAAACA CCCTCAAGTC 
TAG 

 

Protein sequence

MAKLKLDIVT AERSVFSEEV DVVVAPGIEG EMAILPHHAP LMTALQAGEL KAKIGTEEYS 
LVVSGGFLEV RPDRVVVLAD SAERAEEIDI ARAIEAKKRA EASMADKYVP GMLAAETEAS 
LRRAMVRLKV AEKRRKHPQV