| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0505 |
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| Symbol | |
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| ID | 5131914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 490009 |
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| End bp | 491211 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529407 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001213968 |
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| Protein GI | 147669150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCAG TCATATTGGC GGCAGGCGAA GGCAGCCGCA TGCGTCCCCT GACCTTTACC
CGTCCCAAGG TTATGCTTCC CATTGCGGGC AAGCCTATTT TGGAGCACCT TTTGATGGAG
GTCAGCGCCG CCGGTATAAA AGAATTTGTA CTGGTAGTGG GTTACCGTGA TGAGCAGGTG
CGTTCATATT TTGCGGATGG TGCAAAATGG GGCGTAAAAA TCAGCTATTG CCAGCAGACC
CGCCAGCTTG GCACTGCCCA TGCCCTGAAA CAGCTTGAAA ATCAGCTTGA GGGCAATTTT
CTGGTTATGA ACGGGGATAT ACTGGCTGAG TCAGCTGATA TTTCCGCTCT GGCCGCAGGT
TCCGAAACTA CTCTTAGTGT GCTTGAGGTA TCAGACCCAA GCAGTCTGGG AGTGCTTGAA
ACAGACGGGG ACAGAGTAAG ATGCATCCAT GAAAAGTCTG CCAATCCCCC TACTAATCTG
GCAAATGCCG GTCTTTACCT GTTTACCCCA AGGATATTTA AAGCTATTTC CGGCACTCCC
CTCTCACCGC GGGGTGAATA TGAAATAACC TCATCTATCC AGCTTCTTAT TGATAACGGC
ACAGAGGTAG GTTACCGCCG TCTTGTTTAC TGGCAGGACG TCAGCTACCC GTGGGATTTG
CTGGATGTAA ATGCTTCCAT GCTTAAAAAC CTTGCCCCTT GTGTATATGG TACAGTAGAG
GAAAATGTGG TTATCAAGGG GACGGTGGAA ATAGGCGAAG GCAGCCTTGT CCGTTCGGGT
GCATATATAG AAGGGCCGGT ATTAATCGGC AAAAACTGTG ACATAGGTCC GAACTGTTAT
ATCCGCCCCT CTACCTCCAT AGGGGATAAT TGCCGGGTTG GGGCTTCGGT TGAGATAAAA
AACTCTATTA TTATGGATAA CACCAAAATC CCCCACCTTA ATTACGTGGG GGACAGTGTT
ATCGGACAAA ACTGCAATCT GGGTGCCGGA ACCAAGCTGG CAAATCTGCG TTTTGACGGA
GCAGATATTA TTGCCGGAGG TGTCAATACC CGCCGCCGTA AGCTGGGGGC TGTACTGGGA
GACGGGGTTG AAACCGGTAT TAACGTAAGC CTTAATCCGG GCGTCCTTAT AGGCTCCGGC
AGCCGTATAG GACCCGGTGC GGTTGTGAGC GGGCTTGTTG AGCCGAACTC ATATATCGGA
TAA
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| Protein sequence | MKAVILAAGE GSRMRPLTFT RPKVMLPIAG KPILEHLLME VSAAGIKEFV LVVGYRDEQV
RSYFADGAKW GVKISYCQQT RQLGTAHALK QLENQLEGNF LVMNGDILAE SADISALAAG
SETTLSVLEV SDPSSLGVLE TDGDRVRCIH EKSANPPTNL ANAGLYLFTP RIFKAISGTP
LSPRGEYEIT SSIQLLIDNG TEVGYRRLVY WQDVSYPWDL LDVNASMLKN LAPCVYGTVE
ENVVIKGTVE IGEGSLVRSG AYIEGPVLIG KNCDIGPNCY IRPSTSIGDN CRVGASVEIK
NSIIMDNTKI PHLNYVGDSV IGQNCNLGAG TKLANLRFDG ADIIAGGVNT RRRKLGAVLG
DGVETGINVS LNPGVLIGSG SRIGPGAVVS GLVEPNSYIG
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