Gene DehaBAV1_0470 details

Gene Information

• Locus tag: DehaBAV1_0470
• Symbol: rplO
• ID: 5131200
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 461921
• End bp: 462382
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640529372
• Product: 50S ribosomal protein L15
• Protein accession: YP_001213933
• Protein GI: 147669115
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000419135
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGACTGC ATGAACTTTC TCCAGCCCCC GGTTCAAGAA AAGACCGCAA GCGGGTAGGC 
CGCGGCGATG CTGGACGGGG TAACTATTCG GGACGCGGCA TGAAGGGTCA AAAAGCCCGC 
TCCGGTGGTG CTACCCGGCC CGGTTTTGAA GGTGGCCAGT TACCCATATA TCTGCGTCTT 
CCCCGGAAAC GCGGGTTCTT TAATCCCTTT CGGATTAAGT ACGCTGTGGT AAACATTGAA 
CAGCTAAATA TGTTTGAAGC TGGCACTGAG GTCACTCCTG AGACCCTGCT GGCGGCAGGC 
TTGATAAGGA ACTTTGTAAA GCCGGTAAAA ATACTTTCTT CCGGACATAT TGACCGGGCT 
CTGGAAGTAA GCGCCCATAA ATTTTCGCAG GCAGCCAAGG CTCAAATTGA AGCTGCTGGC 
GGTAAGGTAC AGGAAATAGA CTATGCGGCA GAAATCGAGT AG 

 

Protein sequence

MRLHELSPAP GSRKDRKRVG RGDAGRGNYS GRGMKGQKAR SGGATRPGFE GGQLPIYLRL 
PRKRGFFNPF RIKYAVVNIE QLNMFEAGTE VTPETLLAAG LIRNFVKPVK ILSSGHIDRA 
LEVSAHKFSQ AAKAQIEAAG GKVQEIDYAA EIE