Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0468 |
Symbol | rpsE |
ID | 5131192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 461228 |
End bp | 461746 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529370 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001213931 |
Protein GI | 147669113 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000218414 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAGCTA AGGTAGAAAG AATCGATCCT TCTGAGCTTG AACTGAATGA CAAGCTTATA TTTATTAACC GCGTAACCAA GGTGGTTAAA GGCGGTAAGC GCATGGGTTT TGCAGCTCTG GTAGTAACTG GAGACGGCAA AAATCACGTA GGTATTGGCG TAGGCAAGGC TAAGGAAGTT CCTTCAGCTA TTTCCAAAGC CAGTGCCAAT GCCAAGCGCA ATCTTTCCCG TATACTTTTA AATGGGACTA CTGTTCCTCA TGAAATCGTT TTCAAGTATG GCGCCGCCCA GGTTTTACTG AAACCGGCTG CTCCCGGTAC CGGCATTATA GCCGGCGGCA GTGTGCGGGC AGTATTGGAA TCCACTGGTA TCAAGGATGT TTTGACCAAG TCTATGGGTT GCAGCAACAA GGCTAACGTT GCCAAGGCTA CTTTAGGCGG TTTGACTGCT ATGCGGGATC CCAAAGCTAC TGTTACCAAG CGGCGCTCTT CGTTGAAAGA GGAGGCTACT GGTGGCTAA
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Protein sequence | MLAKVERIDP SELELNDKLI FINRVTKVVK GGKRMGFAAL VVTGDGKNHV GIGVGKAKEV PSAISKASAN AKRNLSRILL NGTTVPHEIV FKYGAAQVLL KPAAPGTGII AGGSVRAVLE STGIKDVLTK SMGCSNKANV AKATLGGLTA MRDPKATVTK RRSSLKEEAT GG
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