| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0467 |
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| Symbol | rplR |
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| ID | 5131138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 460846 |
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| End bp | 461211 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640529369 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001213930 |
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| Protein GI | 147669112 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000781328 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAG TAAATGCCAG AGAAGCGCGA ATAGTTCGGC ACGAACGGTT ACGCAAGAAG
GTCAGCGGTA CAGAAGCCCG CCCCAGATTA TGCGTTTTCC GGAGTATCGA AAACATTTAT
ACTCAGGTAA TTAATGATAA CTGTGGTTCA ACCCTTGTTC AGGCCTCCAC CAAGGATGCC
GAGCTGAAGG CTGAGCTGGA CGGTAAGACT AAAACCGAAC AGGCAGTTGT TATAGGCAAC
TTGATTGCGA AACGGTCTCT TGAAGCAGGC ATCTCGGAAG TAGTTTTTGA CCGCGGCGGT
TACAAATATC ATGGCCGGGT CAAGGCTTTG GCTGAGGCTG CCCGCTCTGG TGGCCTGAAA
TTCTAA
|
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| Protein sequence | MAKVNAREAR IVRHERLRKK VSGTEARPRL CVFRSIENIY TQVINDNCGS TLVQASTKDA
ELKAELDGKT KTEQAVVIGN LIAKRSLEAG ISEVVFDRGG YKYHGRVKAL AEAARSGGLK
F
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