Gene DehaBAV1_0448 details

Gene Information

• Locus tag: DehaBAV1_0448
• ID: 5131195
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 450643
• End bp: 451113
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640529350
• Product: 30S ribosomal protein S7
• Protein accession: YP_001213911
• Protein GI: 147669093
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000307427
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAGAA GAGCACGAAA ATTTAAAAGA GCAGTTGCCC CGGATTCCAG GTATAACAGC 
CTGATGCTTT CCAATTTCAT AAACAAGCTT ATGATGCACG GCCAGAAGGC CACCGCCCAG 
AGGATTGTTT ATGATGCAAT TGACATAATG GGTAAACAGG AAAATAAAGA GGGTTTGGCG 
GTATTTGAGC AGGGTCTTAA AAATGCCACT CCTTTTATTG AGGTTAAACC CCGCCGTGTA 
GGCGGTGCTA CTTACCAGGT ACCTATTGAG GTGCGTCCTG ACCGCGCCCA GACCATGGCC 
ATGCGCTGGA TTATTAAGGC CGCCCGCAAG CGGACCGGCA AGTCTATGGC TGAAAGGTTG 
GCTTCTGAAA TGCTGGAAGC CTCCCGTGAG CAGGGTGCTG CTGTTAAGAA AAGAGAAGAG 
ACCCACAAGA TGGCCGAGGC CAACCGCGCT TTCGCCCATT ACAGGTGGTA G 

 

Protein sequence

MPRRARKFKR AVAPDSRYNS LMLSNFINKL MMHGQKATAQ RIVYDAIDIM GKQENKEGLA 
VFEQGLKNAT PFIEVKPRRV GGATYQVPIE VRPDRAQTMA MRWIIKAARK RTGKSMAERL 
ASEMLEASRE QGAAVKKREE THKMAEANRA FAHYRW