Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0394 |
Symbol | |
ID | 5131040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 398844 |
End bp | 399356 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529295 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_001213857 |
Protein GI | 147669039 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000865558 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCTC TAGCCAAAGA AGAAATACTC CGCCTCATAA AGTCAGCTAA ACCCCTGCTG GAAGATTACC CTGATCTGGA AAACCAGCTT CAGCCAAACG GGTTTGATTT GAGTTTGAAA CAGGTACGAA GTCTGGAAGG CGAAGGTGTT TTGCCCACCG ACAATGCCCG CCGTAGACTG CCTGTAAATA ACCCGCTTGA GTTTGACCAT AATAACCAGA TAAAACTGAT GCCGGGTATT TACTCTGTAG TCTACAACGA GGTAGTCAAT ATCCCCAAAG ATGTAATGGC ACTGGCCACC CCACGCTCAT CACTTTTACG CAGCGGCTGT ACTGTCAATA CTGCCGTCTG GGATGCAGGC TACTCCGGCC GAAGCGAGTC TTTGCTGGTA GTTTATAATC CGGCCGGGCT GATACTGGAA CGAAACACCC GCCTGATTCA GCTGGTATTT TTCAAGCTTA ATGCCGAAAC CGGCGGTTAC TGCGGCATTT ATCAAAACGA AAACAAAAAC TAA
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Protein sequence | MSALAKEEIL RLIKSAKPLL EDYPDLENQL QPNGFDLSLK QVRSLEGEGV LPTDNARRRL PVNNPLEFDH NNQIKLMPGI YSVVYNEVVN IPKDVMALAT PRSSLLRSGC TVNTAVWDAG YSGRSESLLV VYNPAGLILE RNTRLIQLVF FKLNAETGGY CGIYQNENKN
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