| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0374 |
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| Symbol | |
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| ID | 5132038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 382048 |
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| End bp | 383418 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640529275 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001213837 |
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| Protein GI | 147669019 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase
[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02009] beta-phosphoglucomutase family hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000852801 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTTT TAATAGCCAT TGATACCGCC ACCCCGGATA CCGGGCTGGC TATACTTAGA
GATAATGAAA TAGTTGCCCA GTACAACTGG CTTAGCCACC AGAACCAGAC TGTGGAGCTG
TTGCCCCGGC TGGACTGGCT GCTTGAGTCT GCAGGGCTTA GCCTTAAAGA TGCCACCGCC
ATTGCGGTTT CCATCGGGCC GGGCAGTTTT AACGGCCTGA GGATAGGCCT CAGCACTGTC
AAAAGCCTGG CCTACGCTCT TGATATACCT CTGTGCGGTA TCGGCACGCT GGAACTGGCT
GCATACCCAT ATCTGGCAAG CGGGCTTACG GTATGGGCAC TGCTGCCTTC GGGACAGCAG
GAATATGCTG CGGGAGCTTA TGTAAAAGAC AAAGAAGGTT TAAAAGAAGA GATTAAACCC
CATATCACCA GTCTGGCTGA TTTAGCCGCT AAAATAACCG AACCTTGTGT TATCTGCGGG
CCGATAAGCC AAAACGTCCA GACCGAACTT AAAACCCTGC TTGGGGACAA AAAAACAGTA
TTTGCCCCGG CAGATATACG CCCATCAAGG GCAGTATCGC TGGCAAGGCT GGCTAAAAAG
AGGATTGAAG ACGGTCTTAC AGATAATCCT GCCGGTCTGC AGCCGCTTTA TCTGCGCCGC
CCCCAGATAT CCCCCCGAAA ACACCCCACC GGACTGCCGC TTTCCCAAAA CAAAGCGGTT
ATCTGGGATA TGGACGGAGT GATTGCAGAT TCCGCCCCTC TCCATTTCAG GGCATGGCAG
ACTACTTTTA CTGAAATGGG TTACACTTTT TCCGAAGCAG ATTTTTACCG CACCTTCGGT
TTGCGAAATG ATATGATAAT TTACTCTGTA CTGGGGGAAA AGTCAGAGGC GGATATTATC
CACACTCTGG CTGACCGCAA GGAACACCTG TTCCGTGAAT ATGCCGGACA GGATATAAAA
ATATTTCCCG GCGTAATGGA TTTGCTAAAA TCCCTGAAAG CGGCCGGCTA CCGGATGGCG
ATTGCGTCTT CGGCACCGCT GGCTAATATC AAGCTGGTTA TGACCAAGCT GGGTATAGGT
GACTACTTTC TGGCCACTAT CAGTGAAAAG GATGTTACCA AGGGCAAGCC AAATCCGCAG
GTATTTTTGC TTTCGGCCGC CAGACTGTGT ACCAGACCGG AGGAGTGTCT GGTTATAGAA
GACGCACCCG GCGGGGTGGA AGCGGCTAAA AAAGCCGGCA TGAAGTGCCT GGCTGTTACC
AACAGCCAGC AACCAGAGAC CCTAAAAGAG GCCGATTTGA TAGTTGACAC CCTCGGCAAA
ATTGGTGTAG AAGATATAGC CGGTTTTATA GGTTCACCCG GCGCTAAATA A
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| Protein sequence | MPVLIAIDTA TPDTGLAILR DNEIVAQYNW LSHQNQTVEL LPRLDWLLES AGLSLKDATA
IAVSIGPGSF NGLRIGLSTV KSLAYALDIP LCGIGTLELA AYPYLASGLT VWALLPSGQQ
EYAAGAYVKD KEGLKEEIKP HITSLADLAA KITEPCVICG PISQNVQTEL KTLLGDKKTV
FAPADIRPSR AVSLARLAKK RIEDGLTDNP AGLQPLYLRR PQISPRKHPT GLPLSQNKAV
IWDMDGVIAD SAPLHFRAWQ TTFTEMGYTF SEADFYRTFG LRNDMIIYSV LGEKSEADII
HTLADRKEHL FREYAGQDIK IFPGVMDLLK SLKAAGYRMA IASSAPLANI KLVMTKLGIG
DYFLATISEK DVTKGKPNPQ VFLLSAARLC TRPEECLVIE DAPGGVEAAK KAGMKCLAVT
NSQQPETLKE ADLIVDTLGK IGVEDIAGFI GSPGAK
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