Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0220 |
Symbol | |
ID | 5132134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 226535 |
End bp | 227257 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640529122 |
Product | hypothetical protein |
Protein accession | YP_001213687 |
Protein GI | 147668869 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGTCCCC GAAATGTTTA TTCCCGACCT GAGGTTATTG GCAAAAAAAG CATAGTTCTG GAGGGTAAAG AGATTCACTA TACCCTTAGA AAGAGCCGCT TTTCAGACCT TATCCGCTTG GCGATACGCT CTGCCACCGG TTTGGTAGTT ACCGTCCCCC ACCAATACAA TATGAACGGT CTGGACGATA TCCTGCTACA ACGTTCAGCC TGGATTTTGA AACACCAGAA CAAAATGAAC GCCAACCGCT TTGTGCTGGA GGACGGGCTG CATGACGGAC AGCAAGTTCC CTATCTGGGC AAGCTCTATA CCCTGCGGAT AAAAGAGGGC GGAGAGCGAG GCCATGTGAG TCTGGCCGAA AATACAATCC ATTTGCTTAC CGGCGGCAAA ACTCCGGTTG AAGTAATGGA AAAGTGGTAT CGCCACCGGG CTGCCGGGAT TGTCAAAACC TGCCTTGAGA AAAATGCCAG CAAAATGGGG CTAAGCTTTG GCAGGCTCTG CATACGCGCC CAAAAAACCC GCTGGGGAAG CTGTACCTCA CGGGGTGACC TTAATTTTAA CTGGAAACTG GCAACCATAC CACCGGAAGT AATGGATTAC GTGGTAATCC ATGAACTTTC CCACCGGGTG GAAATGAACC ATACCGACAG GTTCTGGGTA ATAGTTGAAA AGTACTGCCC GAACTGGAAA GCCCTGCGTA AACAGCTGAA AACCTACGAA TAA
|
Protein sequence | MSPRNVYSRP EVIGKKSIVL EGKEIHYTLR KSRFSDLIRL AIRSATGLVV TVPHQYNMNG LDDILLQRSA WILKHQNKMN ANRFVLEDGL HDGQQVPYLG KLYTLRIKEG GERGHVSLAE NTIHLLTGGK TPVEVMEKWY RHRAAGIVKT CLEKNASKMG LSFGRLCIRA QKTRWGSCTS RGDLNFNWKL ATIPPEVMDY VVIHELSHRV EMNHTDRFWV IVEKYCPNWK ALRKQLKTYE
|
| |