Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0115 |
Symbol | |
ID | 5131425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 114986 |
End bp | 115681 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529018 |
Product | integrase catalytic subunit |
Protein accession | YP_001213584 |
Protein GI | 147668766 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGATA TCATTGAACT GGCTAGTAAG TACGGCAGGT ATGGTTATCG GCGAATCACA GCGTTACTCA ATGAAAGAGG CTGGAGAGTG AACCATAAAA GAGTAGAGAG AATTTGGCGT ACCGAGGGAC TCAGGGTGCC CAAGAAGCAG CCCAAGCGGA GTCGGCTATG GCTCAATGAC GGTTCGTGCA TCAGACTAAG ACCGGAGCGT AAGAATCATG TCTGGAGTTA TGATTTTGTC ACTGCCAGAA CCGCTGACGG CCGGGCTTTC CGGATGCTTA ATATCATCGA TGAATATACT CGTGAGTGTC TAGCCATAAC GATCAACCGG CGATTGACTT CAGAAGACGT CATAGACCAA CTCTTTAATC TATTCATTTT TAGGGGTATC CCGGAACATA TAAGGTCAGA CAACGGACCC GAATTTACCG CCAAAGCAAT ACGCAAGTGG TTGACCCGAC TTGGCATCAA GACTCTTTTC ATCGAACCCG GCTCTCCTTG GGAGAATGGC TACATTGAAT CATTCAACGG CAAACTGCGA GATGAATTAT TGAACTTGGA GATCTTTACT ACGCTTGCTG AAGCTCGGGT ATTGATTACT GACTGGAGGA GGCAGTACAA TCAAGTCCGG CCTCACAGCT CTCTTGGTTA TCGTCCTCCA GCACCGGAGG CAATAATGGC AGTGGTAACT ACTTAA
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Protein sequence | MADIIELASK YGRYGYRRIT ALLNERGWRV NHKRVERIWR TEGLRVPKKQ PKRSRLWLND GSCIRLRPER KNHVWSYDFV TARTADGRAF RMLNIIDEYT RECLAITINR RLTSEDVIDQ LFNLFIFRGI PEHIRSDNGP EFTAKAIRKW LTRLGIKTLF IEPGSPWENG YIESFNGKLR DELLNLEIFT TLAEARVLIT DWRRQYNQVR PHSSLGYRPP APEAIMAVVT T
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