| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0080 |
|---|
| Symbol | |
|---|
| ID | 5131146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 84613 |
|---|
| End bp | 85461 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640528984 |
|---|
| Product | Type II site-specific deoxyribonuclease |
|---|
| Protein accession | YP_001213550 |
|---|
| Protein GI | 147668732 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA ACATATTAAC AGCGATTGCC CATTTAGTAG AAAATCCAAA TACACAGTTG
CATCAGCATA ATAAATCAAA AACCCGTGCA AATGCTATGG GAGACTCTTT GGAAGAATAT
ATAAAAGATC TATTTGCCAA TTCTTTAAAT GAGAATGATG TAGTAAAAAA AAATGAAATA
TATAATCAAA AATTTTGCTA CTTTGGCAAC CAAAACAATC CGCCAGATTT TATAATAAAA
AATGGTGATG CAGTTGAAGT TAAAAAAATC GAAACTATGG AATCTTCCCT TGCCCTAAAT
AGTTCATATC CTAAGGACAA ACTCTATTCT ACAAGTAATA TGATTACTGA TGCTTGCCGA
ACTTGCGAAC CCTGGTCAAT CAAAGATTTA CTTTATGCAA TTGGTACCGT TAAAGACGGG
AATTTAAAGG CTCTTTGGAT GGTCTATGGT GATTGTTACG CAGCTGACAG ATCAGTGTAT
GAGAGAATAC AAACGGTCAT TTCTGATGGT GTTAACGGGA TAGAGGATAT TCAATTTTCT
CCAAGTAAAG AACTCGGCAG GGTAAACAAA GTTGATCCGC TTGGTATAAC TTATATGAGG
ATACGCGGCA TGTGGGGTAT AGAAAACCCC AATAAGGTTT TTAACTATAT AGTGAATATA
GACAAAAATG CGCGTATATC TGTTAATTCA ATAATGCTGA AAAGCAAATA TGATTCCTTT
TCTACTCTCG ACAAAGCGAA AATTGCAAGC TTGGCAAATA AGGGTCTAGG GATTAAAGAT
ATTAGAATAA AATCACCTAA TAATCCCGCC AATTTGCTTG ATGCCAAATT AATTAGTTTT
AGGATGTAA
|
|---|
| Protein sequence | MATNILTAIA HLVENPNTQL HQHNKSKTRA NAMGDSLEEY IKDLFANSLN ENDVVKKNEI
YNQKFCYFGN QNNPPDFIIK NGDAVEVKKI ETMESSLALN SSYPKDKLYS TSNMITDACR
TCEPWSIKDL LYAIGTVKDG NLKALWMVYG DCYAADRSVY ERIQTVISDG VNGIEDIQFS
PSKELGRVNK VDPLGITYMR IRGMWGIENP NKVFNYIVNI DKNARISVNS IMLKSKYDSF
STLDKAKIAS LANKGLGIKD IRIKSPNNPA NLLDAKLISF RM
|
|---|
| |