| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0042 |
|---|
| Symbol | |
|---|
| ID | 5131853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | - |
|---|
| Start bp | 37091 |
|---|
| End bp | 38194 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640528943 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_001213512 |
|---|
| Protein GI | 147668694 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000318827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTAA CAATAGGTAT AATAGGTCTG GCTAAAAGCG GACGCACCAC CATTTTCAAC
GCCGCTACCC GCAGTAACGC CGCCACCGGC TCTTATTCAC AGAGTAGTTC GGCCAACGTA
GGCATTGTAA AGGTGCCTGA TGCCCGTTTG AGTCCCCTGG AAGAGATGTT CCACCCCAAG
AAACTCACCC CGGCCGAAAT AAAATATTTT GACGTGGGGG CATCTCTCAA AGGCGGCACT
AAAGACAGCT CGTTTTCAGG TGAACTTTTG ACCCAACTGC AAAACGTAGA TGCCCTGCTT
AATGTTATCC GGGCATTTGA AGACACCGCC ATCCCTCTGC CTGCCGGCGG CATCAACGCC
GAACGTGACC TGACCACCAT GAATGCCGAG CTTATTTTTT CAGACCTGAC TATTATTGAA
AAAAGGCTTA ACCGCATCGG CAGCCAGATG AAGAGTGCCA AACCCCCGGA GAGAGCCGCT
CTGGAACGTG AAAAAGAACT CATGGCCCGA ATCAAAGAAG CCATGGAGAA AGATATTCCC
GTCCGTGATA TGGAAGTGGA TGAGGAAGAG GCCAAAATAC TGTCCGGTTA CCAGTTTCTG
AGCAACAAAC CGGTGCTTAT GGTTATAAAC ATCGGCGAAG ATGACCTGCC CAAGGCCGCC
GAGATGGAAG CCGAACTCAA TACCCGCTAC GGCGGCAAAA ACTACAGGGT GATTGTAATG
TGCGGCAAAC TGGAAGCCGA ACTGATAAAT ATGGACGAGG CTGAAGCCAC CGAATTCCGC
TCAAGTTACG GGCTTAAAGA AACCGGACTT GACCGCACCA TAAGAGCTTC CTATGACCTT
TTAGACCTTA TCTCATTCTT TACCGTAGGG CCGGACGAAG TGCGGGCTTG GACTATTACC
CGCGGTACTA TATCCCAGAA AGCAGCCGGC AAAATCCACT CCGATATAGA ACGGGGATAT
ATACGGGCAG AAATTGTCCA CGTCGGTGAC CTGCTTACCG CCGGTTCACT GGCGGAAGTC
AGAAAACGCG GTCAGCTGAG GCTGGAAGGC AAAACCTATA TAGTACAGGA CGGAGATACC
GCCAACTTCC TGTTTAACGT CTAA
|
|---|
| Protein sequence | MAVTIGIIGL AKSGRTTIFN AATRSNAATG SYSQSSSANV GIVKVPDARL SPLEEMFHPK
KLTPAEIKYF DVGASLKGGT KDSSFSGELL TQLQNVDALL NVIRAFEDTA IPLPAGGINA
ERDLTTMNAE LIFSDLTIIE KRLNRIGSQM KSAKPPERAA LEREKELMAR IKEAMEKDIP
VRDMEVDEEE AKILSGYQFL SNKPVLMVIN IGEDDLPKAA EMEAELNTRY GGKNYRVIVM
CGKLEAELIN MDEAEATEFR SSYGLKETGL DRTIRASYDL LDLISFFTVG PDEVRAWTIT
RGTISQKAAG KIHSDIERGY IRAEIVHVGD LLTAGSLAEV RKRGQLRLEG KTYIVQDGDT
ANFLFNV
|
|---|
| |