Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0008 |
Symbol | |
ID | 5131726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 10728 |
End bp | 11330 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640528909 |
Product | membrane protein |
Protein accession | YP_001213478 |
Protein GI | 147668660 |
COG category | [S] Function unknown |
COG ID | [COG0344] Predicted membrane protein |
TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGGTT CTATCCCCTC AGCTTATCTG GTCACCCGCC GCCTTATCGG GCGGGACATA CGCCAGATGG GCGGGGGGAA TGTGGGGGGA TTAAATACCT TCCGTGAAGT AGGTACGGGG GCAGGCATCA GCGTAGCCTT TATAGATCTG GTTAAAGGCG CTCTGGCAGT TTCTGTTTCC TATTATCTGC TTACCCAAAA TGCCCAGTGG GTTATTCTGA CCGGTTTCAT GGCCGTAATC GGGCATAACT GGTCTGTCTG GCTGGATTTC AAAGGCGGCA AAGGGCTGGG GCCGGCATTC GGGGCAATGC TGTTCTTGCT GCCTGTTTAC GGTCTTCCCC AACAGCTGGG TATACTGGCA CTGCTGGTTT TTATACCTTT AGCCCTTACC CGAAATATAG CCCTAGCCAC CGGGATTGCC CTTTTCAGCC TGCCCTTTTT AGTCTGGTAC GGCAGCCATT CCGAATTTGC CACCCTGATA TCAGTTTTGC TCTTTTTAAT GATAGGGGGC AAGTTCGTAC TGGACAACAG GAAAAGCCTG CGTGACCCGG CTAACCGACG CAACCTGATA GTTGACCACT GGAAACGGCC GGATAAGGGC TAA
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Protein sequence | MLGSIPSAYL VTRRLIGRDI RQMGGGNVGG LNTFREVGTG AGISVAFIDL VKGALAVSVS YYLLTQNAQW VILTGFMAVI GHNWSVWLDF KGGKGLGPAF GAMLFLLPVY GLPQQLGILA LLVFIPLALT RNIALATGIA LFSLPFLVWY GSHSEFATLI SVLLFLMIGG KFVLDNRKSL RDPANRRNLI VDHWKRPDKG
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