Gene Ddes_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2370 
Symbol 
ID7286089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2855428 
End bp2857092 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content52% 
IMG OID643583193 
Productdiguanylate cyclase 
Protein accessionYP_002480942 
Protein GI220905630 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAC TGGCAAAAAG AAAAATTCGT ATTTTTTATT ATGTTACCGG GTTGTTGGCA 
CTGATATTGA TGTCAGTGGC CCTGGCGATC CCGTACTTTA TTTCTGTGCG CACCCAGTTT
GACAGCATGA TCGAGCAATC AAAGGTCCGT ATTCTTGCAG AAAAAAAGCA GACCCTTGTG
GAAAGGGTGG AAAGGGTCAG CGTAGAGATC AGCGCCATGC GCGCCACCGT ATATGCGGAA
TACCAGGCCA TGGCCAAGGC ATTGAGCGCC ATGCTCGGCA CTCTGGACAT GAAGCCTGAA
AAGATCATTG ATGCCTTTGA TCCCCAGGTG ACCAGGCGTA CCACACGGTT TGCCCTGCAT
ATGGCGGGCA TGGGGGTGGC CGTTTTTAAC AGGGCTACCA GCGAGCTTCT GTGGACGGAT
GAAAAAGATC TCGCCCATGT ACTGCGTGAG CGACTTGTGG AGGGGCGGGT CGAGCCTTCG
GCGGATTTTC CTGTATGGGC CGTGGGGCAG CTCGGAGGCG CCCAGGAAGT TGTTGTTTTT
GGCACGGACT GGGCTGTGGA TGAGATAGCC AAAAGCCGCT GCAAGGCCAT TATCCGCACC
CTGCGCTTTC CTCTTAACCA GTATGTATGG ATCAATGAGG TGCGTAACTA CAGCGGCGGC
CCGGGCTATG CCGTGCGGGC CGTGCATGTT GCCGAGCCGG AAACCGAGGG CATGCCCCTG
TCCACAGACA TGGCGGACAT CAGGGGCAAC CTGCCGTACA AGGAAGAACT GGAAGGCGTT
GTCGCGCACG GCGACATATT TTTTACCTAC TATTTCAAAA AGCCGGATTC TGACGAAATA
AGCGAAAAAC TCACGTATGC CAAACTCTAC AAACCGTTTA ACTGGATTGT ATGCACGGGC
ATCTATACAA ACGATATGGA AGTCATCATA CAGAAGCGCG AGGACGACTT CCGCAGTGCA
TTCAAGGACC AGATTATTTC CTTTGCCAGA ATAATTTCCA TCATGGCCCT GCTGTACGCC
GTTTTGATGA TTTTTTTCGA GCGCCACCTT ACGGGCATGG TCAACGGCTT TATTCTCAAG
CTCAAGGATG ACGAAACCGC CTTGCGGGAA GAAAAAAACA AGCTTGATGA TGCCTACAAG
GAACTGGAAC GTGTTGCCTA TTATGACTTT CTTACAGGTC TGCTCAACCG GCGGGCCATG
TATGAACGTC TTGAAAAGGA ATTTTCGCGC GCGCAGCGCG AGGGGCTGCA GTTCTGCCTG
GTGCTGGCCG ATATCGACCA TTTCAAGGTT GTGAACGATA CTTATGGACA TGATGCGGGC
GATGTGGTGC TGCAATCCAT CGCGGAAATT TTTCAGAACA ATATACGGCA GGAAGACTGC
GCCTCCCGCT GGGGCGGCGA GGAATTTCTG ATTCTGGCAA TTTCCTGCGG GCTTGAAGAC
GGGCTGTCGC TGGCGGAAAA GCTGCGCAAG GCCGTTGAGG ATACTCCCAT CCGCATCGGA
GCCGCAATTA TCAATGTCAC CATCACGCTG GGCGTGGTAG AGTACACCAA GGGCAAATCC
TTCAGCACGC TTATCAAAGA GGCGGATTTT TATCTTTACG AGGGCAAGCG CCAGAGAAAC
TGTGTCATGT CCAGTTCCGG CACAGCCAAG GAACCCTTAG AGTAA
 
Protein sequence
MEKLAKRKIR IFYYVTGLLA LILMSVALAI PYFISVRTQF DSMIEQSKVR ILAEKKQTLV 
ERVERVSVEI SAMRATVYAE YQAMAKALSA MLGTLDMKPE KIIDAFDPQV TRRTTRFALH
MAGMGVAVFN RATSELLWTD EKDLAHVLRE RLVEGRVEPS ADFPVWAVGQ LGGAQEVVVF
GTDWAVDEIA KSRCKAIIRT LRFPLNQYVW INEVRNYSGG PGYAVRAVHV AEPETEGMPL
STDMADIRGN LPYKEELEGV VAHGDIFFTY YFKKPDSDEI SEKLTYAKLY KPFNWIVCTG
IYTNDMEVII QKREDDFRSA FKDQIISFAR IISIMALLYA VLMIFFERHL TGMVNGFILK
LKDDETALRE EKNKLDDAYK ELERVAYYDF LTGLLNRRAM YERLEKEFSR AQREGLQFCL
VLADIDHFKV VNDTYGHDAG DVVLQSIAEI FQNNIRQEDC ASRWGGEEFL ILAISCGLED
GLSLAEKLRK AVEDTPIRIG AAIINVTITL GVVEYTKGKS FSTLIKEADF YLYEGKRQRN
CVMSSSGTAK EPLE