Gene Ddes_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2188 
Symbol 
ID7285904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2638878 
End bp2640299 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content61% 
IMG OID643583010 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_002480762 
Protein GI220905450 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA ACATCGGTAA AATCGTCCAG GTTATCGGCG CTGTCGTGGA CGTTGAGTTC 
AGCGACGGCA ACCTGCCGAA TATCTTCACC GCCCTGGAGA TCAAAAACCC GAACAACACC
GACGCCCCGG AACTGATCTG TGAAGTGGCA CAGCACCTGG GCGACAATGT TGTCCGCACC
ATCGCAATGG ACGCCACCGA AGGTCTGGTG CGCGGCATGG ACGCGGTCGA TACCGGCCAG
CCCATCATGG TGCCCGTGGG CAAGCCCTCC GTGGGCCGTA TTCTCAACGT TATCGGCCGC
CCCGTGGACG AAATGGGACC CATTAACGCT GAAAAATACT ATCCCATTCA CCGCCCGGCT
CCGGCCTTTA CCGACCAGAA CACCAAGGTC GAACTGCTGG AAACCGGCAT CAAGGTTGTG
GACCTGCTTG TGCCCTTTCC CAAGGGCGGC AAGATGGGCC TCTTCGGCGG CGCCGGCGTG
GGCAAGACCG TTATCCTGAT GGAGATGATC AACAACATCG CCAAGCAGCA CGGCGGTTCT
TCGGTCTTCG CGGGCGTGGG CGAACGCACC CGTGAAGGGA ACGACCTCTA TCACGAACTC
AAGGATGCGG GCGTTCTGGA ACGCGCCACC CTTGTGTACG GGCAGATGAA CGAGCCTCCG
GGAGCGCGTG CGCGCGTGGC CCTTACCGCT CTGGCCTGCG CGGAATACTT CCGCGATGAA
GAACACCAGG ACGTGCTCCT CTTCATCGAC AACATCTTCC GCTTTACCCA GGCCGGTTCC
GAAGTGTCCG CCCTTCTGGG CCGCATGCCT TCGGCCGTGG GCTACCAGCC CACCCTTGGC
ACGGACCTTG GTTCGCTGCA GGAACGCATC ACGTCCACCA ATACCGGTTC CATCACGTCG
GTGCAGGCCG TTTACGTACC TGCTGACGAC CTGACTGACC CGGCCCCGGC CACCACGTTC
TCGCACCTGG ACGGCACGCT CGTGCTTTCG CGCCAGATCG CGGAACTGGG CATCTACCCC
GCCGTGGACC CGCTGGACTC CACCTCGCGC ATTCTTGACC CCAACGTGGT GGGTGAAGAA
CACTACGCGG TGGCCCGGCG TGTGCAGATG GTGCTGCAGA AGTACAAAGA ACTGCAGGAC
ATCATCGCCA TTCTCGGCAT GGACGAACTG TCGGACGAAG ACAAGCTCAC CGTGGCGCGC
GCGCGCCGCA TCCAGCGCTT CCTGTCCCAG CCCTTCCACG TGGCCGAAAC CTTTACCGGC
ACTCCCGGCC AGTACGTGAA CCTCGAAGAC ACCATCAAGG GCTTCAAGGG CATTCTGGAC
GGCGCCTATG ACCACATGGC TGAAGGCGAC TTCTACATGC TGGGCGGTAT TGAACAGGCC
GTGGCCAAGT ATGAGCAGCG CAAGCTGCAG GAAGAAAACT AA
 
Protein sequence
MSKNIGKIVQ VIGAVVDVEF SDGNLPNIFT ALEIKNPNNT DAPELICEVA QHLGDNVVRT 
IAMDATEGLV RGMDAVDTGQ PIMVPVGKPS VGRILNVIGR PVDEMGPINA EKYYPIHRPA
PAFTDQNTKV ELLETGIKVV DLLVPFPKGG KMGLFGGAGV GKTVILMEMI NNIAKQHGGS
SVFAGVGERT REGNDLYHEL KDAGVLERAT LVYGQMNEPP GARARVALTA LACAEYFRDE
EHQDVLLFID NIFRFTQAGS EVSALLGRMP SAVGYQPTLG TDLGSLQERI TSTNTGSITS
VQAVYVPADD LTDPAPATTF SHLDGTLVLS RQIAELGIYP AVDPLDSTSR ILDPNVVGEE
HYAVARRVQM VLQKYKELQD IIAILGMDEL SDEDKLTVAR ARRIQRFLSQ PFHVAETFTG
TPGQYVNLED TIKGFKGILD GAYDHMAEGD FYMLGGIEQA VAKYEQRKLQ EEN