Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2154 |
Symbol | gatA |
ID | 7285870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2597673 |
End bp | 2599133 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643582976 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_002480728 |
Protein GI | 220905416 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA TATGCTCCCT CTCTCTCACG GCTGTGGCCC AGGCCCTGCA AAAAAAAGAA CTGAGCGCGG TGGATGTCAC CACGGCCTGC CTTGACCGCA TCACCGCCAC AGAGCCGCAT CTGGCCGCCC TGCTTTACGT GAATGCCGAA AACGCGCTGG CCCGTGCCAC CACGCTGGAC AGCGAAGGCC CCGATGCCGC ACGGCCGCTG TGGGGTGTAC CTGTCACGCT CAAGGACGCC TTTTCCACCA GGGGCATGCC CACCACGGCC GGTTCGCGCA TGCTTGAAGG CTATACGCCC TTCTACGATG CCTTTGCCGT GCAAAAACTG CACGAAGCCG GGGCCGTCAT TCTGGGCAAA ACAAACCTGG ACGAGTTCGC CATGGGCTCC AGCACGGAAA ACTCGGCCTT CAAGGTCACA CGTAATCCCT GGAACCTCAA CAAGGTTCCG GGCGGGTCCA GCGGCGGCTC CGCCGCGTCG GTAACAGCCG GACAGTGCTT CGCTTCTCTG GGAACCGACA CCGGCGGCTC CATACGCCAG CCTGCGTCCT TCTGCGGCTG CGTGGGCCTC AAGCCCACAT ATGGGCGGGT TTCGCGCTAC GGGGTCATCG CCTATGGCTC GTCCCTTGAT CAGGTCGGCC CCCTCACACG TAGTGTGGAA GACTGCGCCC GCGTACTGAC GGCCATTGCC GGATATGATT CACGCGACAA TACCTGCGAT CCGCGCCCGG CAGAAGACTA TGCCGCGACT CTGTCTTCGC GGCCCCTCAA GGGCGCGCGC CTGGGCATTC CCAGGGAATT TTACGGCCAG GGGCTGAGCG ACGAGGTGCG GGCAGCCTGC GAGGCCGCCA TACAGGCCGC CAGAAACCAG GACGCGGAAC TGGTGGAAGT AAGCCTGCCC CACACGGATG CGGCCATTGC CACCTACTAC ATTATCGCCA TGGCCGAAGC CAGCTCAAAC CTGGCCCGCT TTGACGGCGT ACGCTTCGGC CACCGCTCGG CAGACATCAA AAACCTTGAC GATCTCTATG TACACAGCCG CACCGAGGGC TTCGGGCCGG AAGTCAAGCG CCGCATCATG CTTGGGGCCT ACGTGCTGTC ATCCGGCTAT TACGATGCCT ACTACCGCAA GGCCGCCCAG GTGCGCCGTC TTATCCGTGA TGAACTGCTC GCGGCTCTCG GCCAGTGCGA TGCCCTGCTG GCTCCCGTAT CGCCCGTGAC CGCGCGCGAC CTGGGCGGCA ACACCGCTGA TCCCCTGCAG ATTTACCTTA TGGACGCCTA TACCCTGTCC CTGAACCTGG CCGGCCTGCC GGGCCTCTCC TTGCCTGTGG GCCTTGGGGC AAAAAGCGGC ATGCCCGTGG GCATGCAGAT CATTGGCAAG CCTTTTGAAG AAACGCAGGT GCTGGCCCTT GGGCACAGCC TGGAGCAGGC ACTGCCCGGC ATCGGCAGGC CTGCGCTGTA A
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Protein sequence | MTDICSLSLT AVAQALQKKE LSAVDVTTAC LDRITATEPH LAALLYVNAE NALARATTLD SEGPDAARPL WGVPVTLKDA FSTRGMPTTA GSRMLEGYTP FYDAFAVQKL HEAGAVILGK TNLDEFAMGS STENSAFKVT RNPWNLNKVP GGSSGGSAAS VTAGQCFASL GTDTGGSIRQ PASFCGCVGL KPTYGRVSRY GVIAYGSSLD QVGPLTRSVE DCARVLTAIA GYDSRDNTCD PRPAEDYAAT LSSRPLKGAR LGIPREFYGQ GLSDEVRAAC EAAIQAARNQ DAELVEVSLP HTDAAIATYY IIAMAEASSN LARFDGVRFG HRSADIKNLD DLYVHSRTEG FGPEVKRRIM LGAYVLSSGY YDAYYRKAAQ VRRLIRDELL AALGQCDALL APVSPVTARD LGGNTADPLQ IYLMDAYTLS LNLAGLPGLS LPVGLGAKSG MPVGMQIIGK PFEETQVLAL GHSLEQALPG IGRPAL
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