| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2083 |
|---|
| Symbol | |
|---|
| ID | 7285799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2508158 |
|---|
| End bp | 2509018 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643582905 |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_002480657 |
|---|
| Protein GI | 220905345 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAC GCCGTGCCAA AACAGCGGGC TTCTGCATGG GCGTGAGCCT CGCCCTGCAA
AAACTCAATA CCGCCCTGGA GCGCCGCGCC GGCCAGAGCG CGGGAGCGGG GCGCATATGC
ACGCTCGGCC CCATTATCCA CAACCCGCAG GTACTGGCGG AGTATGAGAC CCGTGGTGTG
GTTTGCGTCA ATGACCCGGC GCAGCTGCGC CAGGATGATG TGGCCGTCAT ACGCGCGCAC
GGCATCACCC GGCAGGTGGA ACAGGCCGTA TGCGCAAGCG GGGCCACCGT GGTGGACGCC
ACCTGCCCCA AGGTCAAAAA GGCGCAGCTT TCCATCGCCC GCGCCACATC GCAGGGGGCG
ACCCTGCTGC TTTTCGGCGA AGAAGATCAC CCCGAGGTAC GCGGCCTCAT ATCCTACGCC
TGCGGCCCGG CCCACGTATT CGGCAATGCC GTAGAACTGG CGGCCCTGCC TCTTGACCCC
GCGCAGCCCT ACGTGCTGGC TTCGCAGACC ACGCAGGACC GCGAAATATT TACTTCCATT
CAGGAAAGCC TGAGCCGCGC CCTGGACGAC CTCACGATTT TATCCACCAT TTGCGATGCC
ACCCGCGAGC GGCAGGAAGA GGCCAGAAAC ATTGCCTCAT CGGTAGATGT CATGGTAGTC
GTTGGTGGAC GACAGAGCGG CAATACCCGG CGACTTGCGG ATGTGGCCGC ACTGAACGGC
ATCGCCACCT ATCATGTGGA GAGCGCCGAA GAGCTTGAAC CGAAAAATTT TGCAAATAAA
CCCCGTGTGG GCCTTACGGC TGGCGCATCT ACGCCGAAAA GCCTGATAGA CGCCGCCGAA
AAGTGGCTTT CTTCGCTATA A
|
|---|
| Protein sequence | MNVRRAKTAG FCMGVSLALQ KLNTALERRA GQSAGAGRIC TLGPIIHNPQ VLAEYETRGV
VCVNDPAQLR QDDVAVIRAH GITRQVEQAV CASGATVVDA TCPKVKKAQL SIARATSQGA
TLLLFGEEDH PEVRGLISYA CGPAHVFGNA VELAALPLDP AQPYVLASQT TQDREIFTSI
QESLSRALDD LTILSTICDA TRERQEEARN IASSVDVMVV VGGRQSGNTR RLADVAALNG
IATYHVESAE ELEPKNFANK PRVGLTAGAS TPKSLIDAAE KWLSSL
|
|---|
| |