Gene Ddes_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1991 
Symbol 
ID7285707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2396971 
End bp2399121 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content59% 
IMG OID643582813 
Productprotein of unknown function DUF162 
Protein accessionYP_002480565 
Protein GI220905253 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGACG CCCTTAAAAG CAGCTCCGGT TACCACAAGG AACTGGACGA AGCCCTGAAC 
GACGAATTTT TGCGTCGCAC CCTCGACACC TTTGCCGTGG CCTATCGCGC CAACCGCGAA
GCCGTGTTCA AAGAAGTGGA CGAACGCGCC CTCATTGCCC AGGTGGCCGA TGCCAAGGAC
TACGCCTGTC AGCATATGGA AGAACTGTAC ACCCAGTTCA AGGCCGAAGC TGAAAAGCGT
GGTGTGCATG TGCACCGCGC CGCTACGGCT GCCGAAGCCA ACGAGATCAT TTCGCGCATT
GCCAGGGAAA ACAACGTCAA GCGCGTAGTG AAGTCCAAGT CGATGACGGC TGAAGAAATC
GAGCTTACTC CTGCCCTTGA GGCCCAGGGC CTCATTGTGG ATGAAACCGA CCTTGGCGAA
TGGATCATCC AGTTGCGGCA CGAAGGCCCT TCCCACATGG TCATGCCCGC CATCCATCTT
TCACGCTATC AGGTGGCCGA TGACTTCACC AAGGCCACCG GCGTAAAGCA GGATTCGGAC
GTGCAGCACC TGGTCAAGGT GGCCCGTGTG CAGCTGCGCC GCAAGTTCAT TGCCGCGGAT
ATGGGCATCA GCGGCTGTAA CTTCGCCGTG GCCGAAAACG GCTCGGTGTC CACCGTGACC
AACGAGGGCA ACGCCCGCAT GGTCACCACA CTGCCGCGCG TGCATGTGGC CATTGCCGGT
CTGGACAAGC TCGTTGCCAA GCTGGACGAC GCCCTTACGG CCCTGCTGGT GCTGCCCCGC
AACGCCACTG CCCAGCGCAT CACCTCCTAC GTCACCTGGA TGTGCGGCGC GGGTCCCTGC
GCGGCCAATG CGGACGATAA AAAGATCATG CATGTGGTCT TTCTGGACAA CGGGCGTACC
GAGATTGCCA AGGATCCGCT GTTCAAGCAG ATATTCCGCT GCGTGCGCTG CGGCGCCTGC
GCCAACGTCT GCCCCGTGTA CCGCCTGGTG GGCGGCCACA AGATGGGCTA CATCTACATT
GGCGCCATTG GCCTTATTCT TACCTACTTC TTCCACGGTA AAGACCGCGC GCGCATTCTG
AGCCAGAACT GCATGGGATG CGAATCCTGC GCCAATGTGT GCGCCGGCGG CATCGAGCTG
CCGCGCCTCA TCCGCGAAAT CCGCGCGCGT CTCAATGAAG AGCAGGGCGC TCCCATTGAA
GCCAACCTGC TGTCGGCCGT CATGAAGAAC CGCAAGCTCT TCCACCGGCT GCTCAAGTTC
GCCAGCTTTG CCCAGAAGCC CTTTACCCGC GGAACGCAGT TCCAGCGTCA CCTGCCCTCA
ATATTTATGG GCAAGCACAA CTTCAAGGCG CTGCCCGCCA TCGCCAACAA GTCCTTCCGT
GACCGCTGGC CCGAAATTGC GCCCAGGGTG CAGAATCCCA CCATGCGTGT GGCCATCTTC
AGCGGCTGCG CCCAGGACTT CATCTACCCC GAGCAGCTGG AAGCCTGCGT GAAAATTCTT
GCCGCCAAAA ATGTGGCGGT GGAATTCCCC ATGGACCAGT CCTGCTGCGG CCTGCCCCTG
GAAATGATGG GACAGCGCAA AACCTCCATT GATGTGGCCA AGCAGAACAT CGCGGCTTTC
CGCGGCGGCA ACTATGACTA CATCATCACG CTCTGCGCAA GCTGCGCCGG GCACCTCAAA
CATCATTATC CGCAGATCCT GGACAAGGAT TACGCAGTGG TGGAAGGTCA GGCCTTTGCG
GCCAAGGTCA TTGATTTCAG CTCTTTTGTG CATGACGTGC TGGGCCTCAA GCCCGAAGAC
TTCCACAAGT CCGGGCAGAA GGTCACCTAT CATGCTTCGT GCCACCTCTG TCGTGGCCTG
GGCGTGAAAA AGGCCCCCCG TGAGCTTATC GCTGACGCGG CGGAATACGT ACCCTGCGAG
GAAGAAGAAG TCTGCTGCGG CTTTGGTGGC AGCTACTCCG TGAAGTTCCC CGAAATATCG
GCGCAGCTTC TGGAAAAGAA AATCAACAAT ATGAAGGCCA CCGGAGCCGA CCGCCTGGTG
GTGGACTGCC CCGGCTGCGT CATGCAGCTG CGCGGCGGCG CTGAAAAGCA GGGGCTGAAG
ATCAAGGTCG ACCACATTTC GGAATTGCTG GCCGACAATC TGAAAAAATA A
 
Protein sequence
MHDALKSSSG YHKELDEALN DEFLRRTLDT FAVAYRANRE AVFKEVDERA LIAQVADAKD 
YACQHMEELY TQFKAEAEKR GVHVHRAATA AEANEIISRI ARENNVKRVV KSKSMTAEEI
ELTPALEAQG LIVDETDLGE WIIQLRHEGP SHMVMPAIHL SRYQVADDFT KATGVKQDSD
VQHLVKVARV QLRRKFIAAD MGISGCNFAV AENGSVSTVT NEGNARMVTT LPRVHVAIAG
LDKLVAKLDD ALTALLVLPR NATAQRITSY VTWMCGAGPC AANADDKKIM HVVFLDNGRT
EIAKDPLFKQ IFRCVRCGAC ANVCPVYRLV GGHKMGYIYI GAIGLILTYF FHGKDRARIL
SQNCMGCESC ANVCAGGIEL PRLIREIRAR LNEEQGAPIE ANLLSAVMKN RKLFHRLLKF
ASFAQKPFTR GTQFQRHLPS IFMGKHNFKA LPAIANKSFR DRWPEIAPRV QNPTMRVAIF
SGCAQDFIYP EQLEACVKIL AAKNVAVEFP MDQSCCGLPL EMMGQRKTSI DVAKQNIAAF
RGGNYDYIIT LCASCAGHLK HHYPQILDKD YAVVEGQAFA AKVIDFSSFV HDVLGLKPED
FHKSGQKVTY HASCHLCRGL GVKKAPRELI ADAAEYVPCE EEEVCCGFGG SYSVKFPEIS
AQLLEKKINN MKATGADRLV VDCPGCVMQL RGGAEKQGLK IKVDHISELL ADNLKK