Gene Ddes_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1931 
Symbol 
ID7285647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2324847 
End bp2326169 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content61% 
IMG OID643582753 
Productamidohydrolase 
Protein accessionYP_002480505 
Protein GI220905193 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.64184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCCT GCCAGACACT TGTTCACGCC GCCCTCATTG TCACTCAGGA CAAAGAACGC 
CGCATTCTTG AAAACGCCAG CATGGCCGTT ACAGACGGCA TCGTGGCCGA TCTCGGCCCG
CGTCATGAAA TGATCACCTG CTGGCAGCCT CGCCACGAAG CCGATTTCGG CCGGTGCCTG
TTGCTGCCGG GCCTTGTCAA TGCCCATACG CATTCGGCCA TGACCTTTTT GCGCGGCCTG
GCCGATGACA TGCCCCTTAT GGACTGGCTC AACAAGCGCA TCTTTCCGGT GGAGCAAAAG
CTCACGCCCG AAATCGTGCG CCTTGGCAGC CTTATGGGCT ATGCGGAGAT GCTGCGCACC
GGCACAACAG CCTGCGTGGA TATGTACATT TTTGAAAAAG AGGCCATGGC TGCTGCGGAT
CAAGCCGGGC TGCGCTGCCT GGGGGGCGAG GTGGTTTTTG CCTTTCCTTC CGCCGCCTTT
CCCGGCCCGG AGGCGGCCCT CGAGGAAACC CGCGCCCTGG CACAAAAATA CGCGGGGCAT
CCCAGACTGA GCATAGCCGT CAACCCGCAC AGCGTTTACA CCACGACGCC AGAAATACTC
GCCGCCTGCC GCGACCTTGC CCGCGAGCTG GCCCTGCCGC TTCACATGCA TCTGGCCGAA
ACAGCCGAAG AAACACAGAT ATGCCTGCAT GCGCACGGTA AAAGGCCCGT GGCCTGCTGC
CGCAGCCTTG AGCTGCTGGA TGGCCCCTGC ACGCTGGCCC ATGTGGTGGA CGTCACCCCG
GACGAACTGG ACTTCCTGGC CCAAAGGGGC GCGGTGGCGG TCCATAATAT TTCCTCAAAC
ATGAAGCTTG CCTCCGGCGC ATCCCCCGTA CCCGCCATGC TTGAGCGGGG CATGCCCGTC
GCCTTGGGAA CAGACGGAGC CGCCAGCAAC AACCGGCTTA ACATGTTTAC CGAAATGGGT
CGTGCCGCCC TGCTGCACAA GCTCACCGGC ATGGATCCTA CCCTTCTGCC GGCCCAGACC
GTGCTGGACA TGGCCACTCT TGGCGGAGCG GCCGCCATGC ACGACAACCG CCTGGGCAGC
CTGGCCGTGG GCAAGGCGGC GGACTGCGTG GCCCTGGACC TTGCGGCCCC CAATATGCAA
CCCCTGTACA ATGCCGTTTC ACACCTTGTT TACGCTGCCA CCGGCATGGA AAACCGTATG
ACGATGATTG CCGGAGAAAT TGTTTATGAG GATGGAAAAT TTACCCGTTT CGACTATGAC
GCCCTGTGCC GCGAAATGAC CTCCATACGT GACTTTGTAC GCCGTCAGGC CGGTTTGGCC
TGA
 
Protein sequence
MRPCQTLVHA ALIVTQDKER RILENASMAV TDGIVADLGP RHEMITCWQP RHEADFGRCL 
LLPGLVNAHT HSAMTFLRGL ADDMPLMDWL NKRIFPVEQK LTPEIVRLGS LMGYAEMLRT
GTTACVDMYI FEKEAMAAAD QAGLRCLGGE VVFAFPSAAF PGPEAALEET RALAQKYAGH
PRLSIAVNPH SVYTTTPEIL AACRDLAREL ALPLHMHLAE TAEETQICLH AHGKRPVACC
RSLELLDGPC TLAHVVDVTP DELDFLAQRG AVAVHNISSN MKLASGASPV PAMLERGMPV
ALGTDGAASN NRLNMFTEMG RAALLHKLTG MDPTLLPAQT VLDMATLGGA AAMHDNRLGS
LAVGKAADCV ALDLAAPNMQ PLYNAVSHLV YAATGMENRM TMIAGEIVYE DGKFTRFDYD
ALCREMTSIR DFVRRQAGLA