Gene Ddes_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1903 
Symbol 
ID7285618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2290937 
End bp2292628 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content59% 
IMG OID643582724 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_002480477 
Protein GI220905165 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGTA CAGGTGCGCA GATTCTCCTT GAGTCCCTGA AGAGAGAAGG CGTTGACGTG 
CTGTTCGGGT ATCCCGGCGG CGCTGTGATT GACATCTATG ACGAACTGCC GCGACATCAA 
GAAATACGTC ACGTGCTGGT ACGACACGAA CAAGGGGCTG TGCACGCGGC TGACGGCTAT 
GCCCGCGCTT CCGGCAAGGT AGGCGCCTGC CTGGTAACTT CCGGTCCCGG AGCCACCAAT 
ACGGTGACGG GCATAGCCAC AGCCTATTCC GATTCCATTC CTCTGGTAGT GATTACGGGG 
CAGGTTCCCA CACAACTGAT CGGCAACGAT GCCTTTCAGG AAGTGGATAT CGTGGGCATC 
ACCCGGCCCT GTACCAAACA CAATTTTCTG GTAAAGGACA TCAGCAAGCT GGCCCTTACC 
ATCCGTCAGG CTTTTTATCT GGCGCGCACG GGCCGCCCCG GCCCCGTACT CATTGACCTG 
CCCAAAGACG TCATGCAGGC CAAGGCCGAG TTCGTGTGGC CTGAAGAAGT CTACATGCGC 
AGCTACAACC CCACCTACAA GCCCAACCTC AACCAGTTGC GGCGCTCGGT AGAAGAGCTG 
GCCCGGGCGG AACGCCCGGT CATTCTGGCC GGGGGCGGGG TTATCATGTC CGATGCGGCC 
GAGGCCCTCA CGAGCCTTGC GCGCAAGCTG CAGATTCCCG TCACCTGTTC GCTCATGGGC 
CTTGGGGCTT TTCCCGCCAC CGACCCGCTG TGGCTCGGCA TGGTCGGCAT GCACGGAACC 
TATGCCGCCA ATCTGGCCAT CAACAATGCC GATGTGCTGG TATGCGTGGG CGCGCGCTTT 
GATGACCGCG TCACCGGAAA ACTGGCGGGC TTCGCGCCCA AGGCGCGCAT TGTGCATATT 
GATATCGACC CCACATCCAT ACGCAAGAAT GTGGAAGTAC ACGTTCCTGT GGTGGGCGAC 
TGCCGCCTGG CGCTTGAAGG CATGGGCGAA ATCTGCAACG CCAAGCTTGA AGGCAAAGAC 
TGGAGCAGCG AACACGCCGC GTGGCTTGAG GCCGTGGGCG AATGGAAGAA AAGCAAGCCT 
CTCTGCTACC AGAAAAACCA CAACATCAAG CCGCAGGAAG TCATCCAGAC CCTGTACGAG 
CTTTCCAACG ACGATGCCAT CATTGCCACC GAAGTGGGCC AGCACCAGAT GTGGGTAGCC 
CAGTTCTATA CGTTCACCAG GCCGCGCACC CTGCTCACCA GCGGAGGCCT CGGCACCATG 
GGGTACGGCT TTCCCGCGTC CATCGGCGCA CAGTTTGCCT TTCCCCACAA AAAAGTCATC 
ACCGTCGCGG GCGACGCCTC ATTGCAGATG AACATTCAGG AGCTGGCTAC CGTGGTTGCC 
AACAGGCTGC CCATCAAGGT GGTCATCCTG AACAACCGCC ATCTCGGCAT GGTGCGCCAG 
TGGCAGGAGC TCTTTTACAA CCAGAACTAC AGCTCCACCA ACATGGAGGC CCAGCCGGAC 
TTTGTGAAGC TGGCCGAAGC CTACGGGGCC GAAGGCTACC GCATTGAAAA ACCCGAAGAC 
CTGCGTGCCA CGCTTGAAAA GGCCCTTGCC ACACCCAACC CGGCCTTTAT CGACGTAGTG 
GTTGAACGCG AGGAAAACGT GTACCCCATC GTGCCTGCCG GCGCGGCGCT TGATGAAATG 
TTGCTGGTGT AA
 
Protein sequence
MECTGAQILL ESLKREGVDV LFGYPGGAVI DIYDELPRHQ EIRHVLVRHE QGAVHAADGY 
ARASGKVGAC LVTSGPGATN TVTGIATAYS DSIPLVVITG QVPTQLIGND AFQEVDIVGI 
TRPCTKHNFL VKDISKLALT IRQAFYLART GRPGPVLIDL PKDVMQAKAE FVWPEEVYMR 
SYNPTYKPNL NQLRRSVEEL ARAERPVILA GGGVIMSDAA EALTSLARKL QIPVTCSLMG 
LGAFPATDPL WLGMVGMHGT YAANLAINNA DVLVCVGARF DDRVTGKLAG FAPKARIVHI 
DIDPTSIRKN VEVHVPVVGD CRLALEGMGE ICNAKLEGKD WSSEHAAWLE AVGEWKKSKP 
LCYQKNHNIK PQEVIQTLYE LSNDDAIIAT EVGQHQMWVA QFYTFTRPRT LLTSGGLGTM 
GYGFPASIGA QFAFPHKKVI TVAGDASLQM NIQELATVVA NRLPIKVVIL NNRHLGMVRQ 
WQELFYNQNY SSTNMEAQPD FVKLAEAYGA EGYRIEKPED LRATLEKALA TPNPAFIDVV 
VEREENVYPI VPAGAALDEM LLV