Gene Ddes_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1873 
Symbol 
ID7285588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2256986 
End bp2257852 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID643582694 
Productprotein of unknown function DUF161 
Protein accessionYP_002480447 
Protein GI220905135 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.83834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT ATACCTACAA CCACAAGCTG GCCGAATCCG TCTGGTGGAA CCTGCTCTGG 
CTGACTCTCG GCGGCCTGCT CATGACCATC TGCGTGCAAA GCGTGGCCGC ACCCCACGAC 
TTTCTCGCCG GGGGCATCAT GGGCGTGGCC CTGCTGACCA ACTACTGGAC AGGGACGCTC 
ACCCCCCTTG TCTGGTACGC ACTGCTCTGC GCGCCGGTGT ATATTTTCGG CTGGTTTTTT 
GTGGGAAAGC GCTTTCTGCT CTATACGGCG TACGGGACCC TGTGCACCAC GGTTTTCGGC 
TTTTTTATCG ACTTTACCAT CCCCGTACAG GACGACCTCT ACGCCGCGGT TGTAGGCGGC 
GTACTGCACG GCACGGCCTG TGGCATGATG CTGCGTACCC TGGGCAGCGG CGGCGGCACT 
GACGTTATCG CCGTGGTGCT CAAAGACCGC TGGAATTTTT CTATCGGCCA GTTCAATGTC 
ATTTTCAACG GTCTGCTTTT TCTGCTTGGC GCGTACCGCC TGCCCCTGGA CCTTATCGTG 
GCGTCAATGA TCATGATGTT CATCTCGTCC AGCGCCCTTG AGTACGTGCT GGGCATGTTC 
AACAGGCGCA AGCTGGTCAT GGTCATCTCC GACCACGGCG AAGAAATCAG CGAGGCCATT 
CTGGTAACGG AACGCTTCGG GGCGACCATG TTGCGCGGCA AGGGAGCCTA CTCCGGCTCA 
GACCGCGAAA TCCTGCTCAC CGTCACCACC AACATCGCCC TCAAGCGACT GGAAAACCTG 
GTGTACAGCA TTGACCCCAA TGCCCTCTTT ATTGTTGAAA ATACCTTCTA TGTCTCCGGC 
GGGCAGTTTG CCCGGCGCGG GCGGTAG
 
Protein sequence
MKLYTYNHKL AESVWWNLLW LTLGGLLMTI CVQSVAAPHD FLAGGIMGVA LLTNYWTGTL 
TPLVWYALLC APVYIFGWFF VGKRFLLYTA YGTLCTTVFG FFIDFTIPVQ DDLYAAVVGG 
VLHGTACGMM LRTLGSGGGT DVIAVVLKDR WNFSIGQFNV IFNGLLFLLG AYRLPLDLIV 
ASMIMMFISS SALEYVLGMF NRRKLVMVIS DHGEEISEAI LVTERFGATM LRGKGAYSGS 
DREILLTVTT NIALKRLENL VYSIDPNALF IVENTFYVSG GQFARRGR