Gene Ddes_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1862 
Symbol 
ID7285577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2246186 
End bp2246827 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content55% 
IMG OID643582683 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002480436 
Protein GI220905124 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.349014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA CCGTGAAAAC TGACGGCAAG GCCCCTGTAA CCGCCATACC TTCCGAACAT 
TCCCCCTTTG TGGCGGATCA GGGCAGGCAA ACCCGCAACG CGGCTCAGAC CAGGCAGAGA 
ATACTGCTGG CGGCGCGTGG CCTCTTTGCC AACAATAACT ACGAAAGCGT GGGCACACGG 
GAAATAGCGG CCAAGGCCGG GGTCAATGCC ACGCTTATCA ACAGATACTT CGGCTCCAAG 
AAGAAGCTTT TTGTGGCCGT AGTGGAATCC CTTAGTGAAC TGATACCTCC GAGAGACGTG 
GAGGACGACG TGGCTGATCT GCTGGATCAG GCATTGAACA GCATTGTGCA TGAAGGAGAA 
CATAGCCAGT GGCTGGACGA GTTTCGCATA ATCCTTTTTT CGGCGCTTGA TCAGGAAGTT 
TCTGATATTA TAGCCGATTT TTTTGAAAAA AGACGTAAGG GACTGGCGCG GCGATTGACT 
GGCCCCGGTG CTGCCGCCAG AGCAGATGCG GTTTTTTCGC TTCTGACCGG GGCGGCAATA 
GTCGTGAGCC TGCTGCGCGG CAATCAGAAA AATGATCTGG ACCAGAAGGA GTTTCGCAAA 
AAACTGGGCC AGGTGCTGGT CCCGCTGCTT GCAGCCGGGT AA
 
Protein sequence
MSNTVKTDGK APVTAIPSEH SPFVADQGRQ TRNAAQTRQR ILLAARGLFA NNNYESVGTR 
EIAAKAGVNA TLINRYFGSK KKLFVAVVES LSELIPPRDV EDDVADLLDQ ALNSIVHEGE 
HSQWLDEFRI ILFSALDQEV SDIIADFFEK RRKGLARRLT GPGAAARADA VFSLLTGAAI 
VVSLLRGNQK NDLDQKEFRK KLGQVLVPLL AAG