Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1833 |
Symbol | |
ID | 7285546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 2209995 |
End bp | 2212340 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643582653 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_002480408 |
Protein GI | 220905096 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTGCAA TGCCCAAAAA TCTGCCCCAT CCGCAACTGA AGCCCAATAC CGAAGTTGTT TTGCAAAAGC GCTATCTGCG TAAAAATCTG GACGGCAAAA TCATCGAAGC GCCGCGCGAT CTTTTCTGGC GCGTGGCCGC CGCTATTGCA GCCCAGGAAG AAAACTATAA AAATTCGAGC CGTACGCCGA ACCAACTGGC CCGTGATTTT TACGACCTCA TGACCAGCTG GAAATTTCTG CCCAATTCGC CCACCCTCAT GAATGCCGGT ACGGAACTGG GGCAGCTTTC GGCCTGCTTT GTGCTGCCCG TGGGCGACTC CATTGAAGAA ATTTTTGACG CCGTCAAATA CGCCGCCATG ATACACAAGT CCGGCGGTGG CACGGGCTTT TCCTTTTCCC GCCTACGGCC CAAAGATAGC CGCGTAGGCT CCACCGGGGG CGTGGCGTCC GGCCCGGTAT CCTTTTTGCG CATCTTTAAT ACCGCCACTG AACAGATAAA GCAGGGCGGC ACACGGCGCG GGGCCAATAT GGGCATTCTG CGGGTGGATC ATCCGGACAT TCTGGAATTC ATCCGGGCCA AGGAAAAAGA GGGAGAGTTC AATAACTTCA ATCTTTCCGT CGGATTGACA GAATCTTTCA TGCAGGCCGT GGAAAACGAC GAGCAGTATG ACCTTGTTTC GCCCAATAAC GGCGAAGTCA TGAAGCGTCT GCCCGCGCGT GATGTTTTTG ACCTTCTGGT GCGCAAGGCG TGGCAGTCCG GCGATCCGGG TATTGTTTTT CTGGACCGCA TCAATCGCGA CAATCCCACG CCTGATCAAG GCGAGATCGA ATCCACCAAC CCTTGCGGCG AGCAGCCGCT TTTGCCCTTT GAGGCGTGCA ATCTGGGGTC CATCAATCTT TCGTGCTTTC ATGTGCCGGG GCATGAGAAC AGTGCTGACC CCGCTGCGGG CATTGATTGG GACGAACTGC GCCGCGTGGT GCATCTGTCT GTGCGTTTTC TTGACAACGT CATCGATGCT TCGCGTTTTC CGCTTGACCG CATTGGCGAA ACTGTACGCA AAAACCGCAA GATCGGTCTG GGCGTTATGG GCTTTGCGGA CCTGCTCTTT CAGCTCGGCG TGCCCTATGA CTCGCAGCAG GGCCTTGATC TTGGCGAGCG CATCATGGCC TTTGTGCAGG GAGAAGGGCA CAGGGCATCG GCGGAACTGG CTCTGGAGCG CGGGCCTTTC CCGGCCTACG GATCTTCTGT GTTTGCCCGC AAGAAACTCG GGCCTTACCG CAACGCCACG GTAACCACCA TTGCGCCCAC GGGTACGTTG TCGATCATCG CGGGGTGCTC GTCCGGCGTG GAGCCGCTTT TTGCCCTTTG CTTTACCCGT AATATTCTGG ACGGCGAGCG CCTGGTGGAG ATCAATCCGC ATTTTGAGGC AGCGCTGGAA TCCGGAGGCC TGTTCAGCCA TGAGCTGATG GATGCCGTAG TAGCCAAAGG CTCCATTCAG GATATGGACT ATCTGCCTGC CCCGCTGCGC AAGACTTTTG TGACCGCTAT GGATATTGCG CCCCAGTGGC ATCTGCGCAT GCAGGCGGCC TTTCAGCGGC ATACGGACAA TGCCGTGTCC AAAACCGTCA ACCTGTCCAA CAGCGCAACA GAGCAGGACA TCCGCGAAAT TTACTGGCTG GCCTATCAGG AAGGCTGCAA GGGCGTCACC GTATACCGCG ACGGCTGCAA GAGCATTCAG GTGCTGGCTA CCGGCGAAGG GCAGAAAAAA ATGGACAGCG GCTCCGCTGA AGTGGCGGGC GGCAGTGCCC AGAGCGGGCA TGCGTCCGAG CATGCAGACC ATCGGGCTGG CGCGCATGCG GTTGCGGCAG ACGGCCCCAT TGCCGCCGTG CCGTCACTGG TGCGCAAGCG GCCGGATGAG GTTCAGGGCT TCACCCGCAA GGTGCAGACG GGTCTTGGGG CCATGTATCT TACGGTGAAC GAGGTGGACG GCAGACCTTT TGAAGTGTTC GCCACCATCG GCAAGTCCGG GCGTTCCATC ACGGCCAAGG CAGAGGCCAT CGGGCGGCTC GTGTCCCTTG CGCTGCGCTC CGGCGTGCAT GTGCGTGACG TGGTGGCGCA GATCAAGGGC ATCGGCGGCG AGCATCCTGT ATTTCGGGGC AAGGGGCTGC TGCTGTCCAT ACCCGATGCC ATCGCCTGGG TGCTGGAGCA GCGCTATCTC AAGGACGAAG TGGTGGATAC AGTCAGTGAT ATTGCCGTCA GCCGTTGCCC GGACTGTGGC GAAAAGCTGG TATTTCAGGA AGGCTGCCTC ATTTGCCCGG CCTGCGGCTT TTCCCGCTGC GGCTAG
|
Protein sequence | MLAMPKNLPH PQLKPNTEVV LQKRYLRKNL DGKIIEAPRD LFWRVAAAIA AQEENYKNSS RTPNQLARDF YDLMTSWKFL PNSPTLMNAG TELGQLSACF VLPVGDSIEE IFDAVKYAAM IHKSGGGTGF SFSRLRPKDS RVGSTGGVAS GPVSFLRIFN TATEQIKQGG TRRGANMGIL RVDHPDILEF IRAKEKEGEF NNFNLSVGLT ESFMQAVEND EQYDLVSPNN GEVMKRLPAR DVFDLLVRKA WQSGDPGIVF LDRINRDNPT PDQGEIESTN PCGEQPLLPF EACNLGSINL SCFHVPGHEN SADPAAGIDW DELRRVVHLS VRFLDNVIDA SRFPLDRIGE TVRKNRKIGL GVMGFADLLF QLGVPYDSQQ GLDLGERIMA FVQGEGHRAS AELALERGPF PAYGSSVFAR KKLGPYRNAT VTTIAPTGTL SIIAGCSSGV EPLFALCFTR NILDGERLVE INPHFEAALE SGGLFSHELM DAVVAKGSIQ DMDYLPAPLR KTFVTAMDIA PQWHLRMQAA FQRHTDNAVS KTVNLSNSAT EQDIREIYWL AYQEGCKGVT VYRDGCKSIQ VLATGEGQKK MDSGSAEVAG GSAQSGHASE HADHRAGAHA VAADGPIAAV PSLVRKRPDE VQGFTRKVQT GLGAMYLTVN EVDGRPFEVF ATIGKSGRSI TAKAEAIGRL VSLALRSGVH VRDVVAQIKG IGGEHPVFRG KGLLLSIPDA IAWVLEQRYL KDEVVDTVSD IAVSRCPDCG EKLVFQEGCL ICPACGFSRC G
|
| |