| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1759 |
|---|
| Symbol | |
|---|
| ID | 7285471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 2126099 |
|---|
| End bp | 2126791 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643582578 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002480334 |
|---|
| Protein GI | 220905022 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.77798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCAC TTTCAGTAGT TTACCACGCC CTGCCGTCCA TGCTGGCCGG CTGCATAGTC
ACGGTGGGCA ACGTGACCAT TTCTCTCGCC ATGGGCCTTG TGCTCGGCGT TCCTATGGCT
GTGGCCCAGG TTTACGGCGG CCCCTGGCTG CGCCGCCTGG TCGCGGTCTA TGTGTGGTTT
TTCCGGGGAG TGCCCATTCT TGTGCTGCTC TTTCTGTGCT ACGGGCTTTT CATCAGCCTC
GGCCTGCCGG CAGACCCGTT TCTTATATGC TGCCTGGTGC TTGGCTGCAC CAGTACGGCC
TACCAGTCGC AAATTTTCCG GGGAGCCATT GAAAGTCTGC CGCAGGGGCA GCTCAACGCG
GCACGCGCTC TGGGCATGGG TGAAGGCACG GGTATCTGCA GCATCATACT GCCCCAGGCC
ATGCGCTTGT CCATCCCCGG CTGGGCCAAC GAATTTTCCA TTCTGCTCAA AGATTCGGCC
ATCTGCTACG TTCTCGGCAC ACAGGATATC ATGGCAAGAA CGTCTTTTGT GGCCGCACGC
ACGCACGAAC ATCTGGCCCT TTACGCGGCA GCGGGCTGCA TTTATTTTCT GCTGACACTG
GCGGTGCTGA AGCTCCTGCG CCGCCTGGAA AAAAGAGTTC ATGTACCGGG ATACTCCACG
GGCATGGGCA TGGAAGGCAC GGGTGCGGGA TAA
|
|---|
| Protein sequence | MDSLSVVYHA LPSMLAGCIV TVGNVTISLA MGLVLGVPMA VAQVYGGPWL RRLVAVYVWF
FRGVPILVLL FLCYGLFISL GLPADPFLIC CLVLGCTSTA YQSQIFRGAI ESLPQGQLNA
ARALGMGEGT GICSIILPQA MRLSIPGWAN EFSILLKDSA ICYVLGTQDI MARTSFVAAR
THEHLALYAA AGCIYFLLTL AVLKLLRRLE KRVHVPGYST GMGMEGTGAG
|
|---|
| |