| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1730 |
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| Symbol | |
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| ID | 7285442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 2093445 |
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| End bp | 2096369 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643582550 |
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| Product | diguanylate cyclase and serine/threonine protein kinase with TPR repeats |
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| Protein accession | YP_002480306 |
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| Protein GI | 220904994 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000283057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGC ATACAGCGCG CAAAAAAGCC GGGGCGGACC GCAAGACGGC CGCCCGTTCC
GCTGCGGAGC AGGATCCGCG CAATGCGGCG AACAGCGTGG AAGCGGCGGC CGCTCAAGGC
GTACCGTCCA GTGTGCCGGA AGCCGCCTCC GGGCGGGCTG GAGCGCCGGG CGGCGCGGCG
TACCCCGAAT GGGCCGGGCG GCTGGAAGAC TCGCGGGATG TGCCGGCCCG GGACGGAGCC
GGGCAGGGCT GTGACTACTC CGGTCAGCGG GACCTGCGCG AGCTGGCCCG TGAAGACCTT
ATGGAAATGG AAGGATTGCT GTGCAGGCAA CTGGCAGCCT TTTTTTCCTT CAGCGGGCAT
GCCCTGTATT TTCCCAGAAA TCAGGCTTCG GATGAGCCGC AGCTGCTGGC GCGTGAACGC
AAGCTGCTCC TGCCCCTGAT CTGGAAAGAG CAGCTTTTGG GCATGGTCAT GCTGCATGGT
GTTCGCGCCC GTGAGGTACG CCCCCTGCTG GAGATTTTGC CCGCCATTAC CGGGTTGATC
CTTGAGAATC TGGCTCGCGC CAAGGCTGTG CGCACGGATG CGGTTACCAG CCTTGTTACG
GAGGAAAGCC TTTTTGCCCG GATGGAAGGC GAGGCCGAAA GAGTGCGGGC GCACCTTGAA
GAACCGTCTG CCCCTGAGGG GCTTGCCGCG CCCATGCATC GCATGTGTAT GGGCATCGTG
CTCCTGCGCA TGAATAACGG CCCGGATGTG GTGCGGCGGC ACGGTTTTGC CTTTGCCGAA
AATTTCATGC GCAGGTTTGC CGATGCCTGT CGTTCGGTTC TGCCGTCTGA CGTGCTGGCC
GCGCGGGTGG GGCGGCACGA GCTGGCCCTG CTGCTTTCAG CCAGTGGGCG GGGCGCGTGC
CACAAACTGG CCCGTGCGGT ACTTGCGCGT ATGGAGGCCG AGCGTCCTGC TTCGCCGTTG
ACCAGGCAGG TCGTGCATGC GCGTCTGTGC GCCGGGCATG CCTTGTACCC GCAAGACATG
CAGGGTGCTG AAATGGGCCT TGGCATGTAT GAACAGGCGC GTCTGCTTAT GGCTCGCGCC
CGGCTGGCAG CAGATGTGGC AGGCCAGACG GCTGCCGCGG CCGAAGCCGC CGGAGCTGAC
GGAACCCGCG CCGGAGAAAG CCGCATCATG CCCTTTGCCC GTATCCTGCA GGAAGGGGGG
CTGGTGCTTG AGAGCCTGCC CCTGGGGCGC TTGCGCATCA GCCTCGGGCG TCAGGCCAAG
GCGCGTGAAG GCATGCGTTT TGCGGTCTGG AGCGCGGATG CAGGCCAGAA GCCGCGCTAT
AAAGGCGAGG TTGTGCTGCT GCGCGTGGGC GACAGGGATT CTGTCGCCGA AATTTTGCAT
CTGGCGGACG CGGCCCTTCT GCCAATGCCG GGCGACAGTC TGGCCCTTCT TGGGCAAAGC
CCGGTGCTCA GCCCGGATCT GGACGGGCAT GACCCGTCTC TGAGTATCCC CGGTGTGCAG
GAAGCCCTGT TGACGCCGCC CGCCGCGCCA GCGCGGCAGG TACAGGAGCG TGGCGAACCG
GCCGACACGC CGGCAATCCC GCGTGCCCCC GTGCTGGCCC AGGCTGCCCC TTGCGCCGCC
GCAGCTTCCG AACACTCCGG GGCCGCCGGA AATTCTGAAA ACCCGCAGGC GCAGGTCCGC
GCCGTGCCGT TTCCCGCAGT GGCGGCTGAC GGCTCAACAG TGCCGGATGC TGAACAAAAA
GACGGGGCAA ACACCTCTTC TGCGGAAAGC TCCCGGTGCG ACCTGTGTGG GCACGGCGAT
TTTCTTAACC GCTTTGCGCA TGAAAGCGAG CGCTGCGCCC GTTTTGTGCT GGCGATTGTG
CGACTGGAAA ATGCCGAAGA CCATGCTCCG GCCACGGCCC TGCGCCTGTG GAGAAAACTT
TTGCGCAAAC TTGCTCCTGA CACGGAGCAG GCCGAACCGC TCGCCGGTTT GTACGGCAGT
AACAGCCTTA TATTTTTTCA TCCCGGCGTT GAAACACCGG ATGTTGCCGG TCTGTATGAG
AGCCTGTGTG CCGATCTGAA AAACGAAGGA TTTGACGCTG CGGCCGGACT GGCAGCTTTT
CCCTTTTTGC AGTACCGCAA GGCAGAAATG CCGGACTGCG CCCTCAAGGC TCTGGAATAC
GCCCTTCTTT TGCCGCCGCC ACGGGTCGGC ATATGCAATT CCCTGGCGCT CAATATCAGC
GCCGACAGAC GTTACAGCCT GGGCGACGTG TTTGGTGCTC TGGAAGAGTA CAAACTTGCC
CTGCTTGCGG ACAAAGCCAA TGTGATGGCC TGGAACTCAC TTGGCGTGTG CATGGCGGCC
CTGGGGCGCG GACACGAGGC GCGACGCTAT TTTCTTGAAG CGCTGCGGCA TAATCCCGAT
GCAGGCGCGG CCAAGCAGAT TTATTACAAT CTTGGCAATA TTTGCCAGAG CCTGGGAGAG
CGCCGCGCCG CCGCACGCTA CTACCGGCAG TGCGTCAAAG CCGCACCTGA CCACCTTTTT
GCGCATATCC GGCTGGGGCA GCTTTGTGAG CAGGGCGGCA GAAGGGCCGA CGCCCGACGC
TACTATGAGC TGGCGGCAGC CATTGAAGAC GCTTCGCCCG GCAGACCGGG TGTGGCCCGG
CGGCATCTGG CCCGCGTGGC AGCACGCCAG CGCAGGGGTG GCGAGGCCCG CGAGCTTCTG
CACGAGGCCC TGTTGCGCAA CCCGCAAGAC GCGGCGTCCA TGCTGTTGCT GGCAAATATT
TATCTGGACG GCAACGAGGA CCCGGCCGTG GCTGAGCTGC TGGCGCGTAA AAGCGCTGGT
CTGCATGACA GGCCAGAGGC CTGGCAGACG CTGGCGCGCG CCCTGCGCGC TCTTGACAGG
GAGGATGAAG CCCGGCTGGC TGAAGCCAGA GCCGTGCTTG GCTGA
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| Protein sequence | MAQHTARKKA GADRKTAARS AAEQDPRNAA NSVEAAAAQG VPSSVPEAAS GRAGAPGGAA
YPEWAGRLED SRDVPARDGA GQGCDYSGQR DLRELAREDL MEMEGLLCRQ LAAFFSFSGH
ALYFPRNQAS DEPQLLARER KLLLPLIWKE QLLGMVMLHG VRAREVRPLL EILPAITGLI
LENLARAKAV RTDAVTSLVT EESLFARMEG EAERVRAHLE EPSAPEGLAA PMHRMCMGIV
LLRMNNGPDV VRRHGFAFAE NFMRRFADAC RSVLPSDVLA ARVGRHELAL LLSASGRGAC
HKLARAVLAR MEAERPASPL TRQVVHARLC AGHALYPQDM QGAEMGLGMY EQARLLMARA
RLAADVAGQT AAAAEAAGAD GTRAGESRIM PFARILQEGG LVLESLPLGR LRISLGRQAK
AREGMRFAVW SADAGQKPRY KGEVVLLRVG DRDSVAEILH LADAALLPMP GDSLALLGQS
PVLSPDLDGH DPSLSIPGVQ EALLTPPAAP ARQVQERGEP ADTPAIPRAP VLAQAAPCAA
AASEHSGAAG NSENPQAQVR AVPFPAVAAD GSTVPDAEQK DGANTSSAES SRCDLCGHGD
FLNRFAHESE RCARFVLAIV RLENAEDHAP ATALRLWRKL LRKLAPDTEQ AEPLAGLYGS
NSLIFFHPGV ETPDVAGLYE SLCADLKNEG FDAAAGLAAF PFLQYRKAEM PDCALKALEY
ALLLPPPRVG ICNSLALNIS ADRRYSLGDV FGALEEYKLA LLADKANVMA WNSLGVCMAA
LGRGHEARRY FLEALRHNPD AGAAKQIYYN LGNICQSLGE RRAAARYYRQ CVKAAPDHLF
AHIRLGQLCE QGGRRADARR YYELAAAIED ASPGRPGVAR RHLARVAARQ RRGGEARELL
HEALLRNPQD AASMLLLANI YLDGNEDPAV AELLARKSAG LHDRPEAWQT LARALRALDR
EDEARLAEAR AVLG
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