Gene Ddes_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1647 
Symbol 
ID7285350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1981686 
End bp1982555 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content56% 
IMG OID643582460 
Productbeta-lactamase domain protein 
Protein accessionYP_002480224 
Protein GI220904912 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCC CCAATGTGCG CGGATTTTTT GACCCCGTTA CCGCAACCTG GACCTATGTG 
GTCTGGTCCG GTACAGACAG CCGCCGGCGC TGCGCCATTA TCGACAGCGT GCTGGACTAT
GACATGCCCT CAAGCCGCAC CGGCACGGCA TCCGCAGATA CGGTTATTAC ATTTGTACAC
CGGAAAGAGC TTGAGGTAGA GTGGATACTT GAAACACACA TTCATGCGGA CCATATTACC
GCCGCCCGCT ACCTCAAGGA AAGGCTGGGC GGCAAGATAG CCATGAGCAG GCACATGCTG
AATATCATCG CCACCTGGGT TCCCGTTTTT CAGACCGGCG ACGATACCCC GGCCGATGGA
GCAGATTTTG ACCATCTTTT TGAAAACGAT GAAACATTCA CCATTGGTGA CCTCAAGGCC
AAAATCATCC ATACGCCCGG GCATACCCCG GCCGACACCA CCTACATCAT CGAAGATGCC
GCCTTTGTGG GCGACACCAT CTTTCTGCCC GACGTGGGTT CCGGCCGCTG CGATTTCCCG
GGCGGCAGCC CCGAGGACTC CTACGAATCT TCGCGCAAAC TTTTTGCCCT GCCGGACCAT
TACCGCATAT ATGTGGGACA CGACTATCCC CCGGCAGGCA AACGCGGCCC CGAGTGCATG
AGCACCGTCG GCGAACAAAA GCTGAAAAAT GAACGCCTGC ACATGGGCAT TGATAAAAAC
AGCTTCGTCT CGCGCCGTAA GGCAGATGAT ACGGGCAAGG CCGTGCCGCC TCTGCTGCTG
CCCTCCATCC AGGCCAATAT GCGCGCAGGC GACTTTGGCG CACCAACTGG AGGCATTCAG
TACGTAAAAT TGCCGGTAAA CAAGATCTAG
 
Protein sequence
MTAPNVRGFF DPVTATWTYV VWSGTDSRRR CAIIDSVLDY DMPSSRTGTA SADTVITFVH 
RKELEVEWIL ETHIHADHIT AARYLKERLG GKIAMSRHML NIIATWVPVF QTGDDTPADG
ADFDHLFEND ETFTIGDLKA KIIHTPGHTP ADTTYIIEDA AFVGDTIFLP DVGSGRCDFP
GGSPEDSYES SRKLFALPDH YRIYVGHDYP PAGKRGPECM STVGEQKLKN ERLHMGIDKN
SFVSRRKADD TGKAVPPLLL PSIQANMRAG DFGAPTGGIQ YVKLPVNKI