Gene Ddes_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1574 
Symbol 
ID7285272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1895579 
End bp1896025 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content56% 
IMG OID643582383 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_002480152 
Protein GI220904840 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATAC AGTCAGTGGG CATGCGCGCG TACAGTGAGG CCATGCAGCA TTTCAACAGG 
GTAGAGGGCA GCCTGCAGCA GGGTTCGTCT GTCAGCGGCA AAACGCTTTT TTCCCGCACC
CTGGATCAGA GCCTTGCCCG CAGCAAGGTG GATACCGGCG AAAATTTCGG CGCCCAGGTG
GACATGGTGC AGTTTCCCGG CAAGGCGCAT ACCCCGGTAA CTTCCGAGAG CAGCTTTACC
GGAACCCTCA GGGATTCACT GAACAAGGTA AACCAGTTGC AGGGCGTCAA GGATGAAGCC
ATCAGCGAAT TTGCTTCGGG CCGCACCCAG AACGTGCAGG AACTCATGAT AACCATGCAG
AAATCCAGCC TTGCCATGAA GCTGACTACC GCCGTGCGCG GCAAGGTGCT GGAAGCCTAC
AAGGAAATTT CCAAGATGCA GTTCTAG
 
Protein sequence
MSIQSVGMRA YSEAMQHFNR VEGSLQQGSS VSGKTLFSRT LDQSLARSKV DTGENFGAQV 
DMVQFPGKAH TPVTSESSFT GTLRDSLNKV NQLQGVKDEA ISEFASGRTQ NVQELMITMQ
KSSLAMKLTT AVRGKVLEAY KEISKMQF