| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1561 |
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| Symbol | |
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| ID | 7285259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1876655 |
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| End bp | 1877404 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643582371 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002480140 |
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| Protein GI | 220904828 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00198784 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCTA ACTGGAACTG GGGCATATTT TTTGAGCAGG CTCCGTTCGG AAACGTCACC
TACCTTAACT GGTTGATAGA CGGCTTTCTG ACCACTGCGG CTCTTTTTGT CTGTGCCTGG
ATTGTAGCCT TTATTGTAGG CTCGTTTTTT GGAATTCTGC GCACTTTGCC CAGCAAGGCC
CTGCGGACTG TGGGCGCTAC CTATGTCGCC ATTTTTCGTA ACATTCCGCT TATCGTCCAG
TTTTTCATCT GGTATCTGGC CGCTCCCGAC CTTTTACCCC GCGATATCAG CGTATGGTTC
AAGTCTGAGC TGAACCCCAA CGCCCAGTTT TTCATTCTCT CAACCTGCGC GTTGGGCCTG
TTCACGGGCG CGCGCGTATG CGAACAGGTA CGTTCGGGCA TTCTGGCCCT GTCACGAGGG
CAGCGCTATG CCGGACTGGC ACTGGGCCTT ACCCTGCCGC AGACCTACGT TCACGTGCTG
CTTCCCAATG CTTACCGCAT CATCACACCG CCGTTGACCT CCGAAATGCT CAATATGGTC
AAAAACACGG CCGTGGCCTC TACCATAGGC CTTGTGGAAC TGACTTCGCA GGCCAATCGC
CTGCTTGAGT TTTCCGGTTT TGCCTATGAG TCCTTCATTG CGGTCACGCT GGCGTATGTG
TTTTTGAACT TTATCGTCAT GCGGGCCATG AAGATGCTTG AAAAGAAAAT GCGGCTGCCC
TCCACCGGCA TGGGAGGCAA AAATGCTTGA
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| Protein sequence | MQANWNWGIF FEQAPFGNVT YLNWLIDGFL TTAALFVCAW IVAFIVGSFF GILRTLPSKA
LRTVGATYVA IFRNIPLIVQ FFIWYLAAPD LLPRDISVWF KSELNPNAQF FILSTCALGL
FTGARVCEQV RSGILALSRG QRYAGLALGL TLPQTYVHVL LPNAYRIITP PLTSEMLNMV
KNTAVASTIG LVELTSQANR LLEFSGFAYE SFIAVTLAYV FLNFIVMRAM KMLEKKMRLP
STGMGGKNA
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