Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1560 |
Symbol | |
ID | 7285258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1875627 |
End bp | 1876535 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643582370 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_002480139 |
Protein GI | 220904827 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000128549 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGA AGAAAACCCT TTTGTCCGCT CTGGCGGCCC TGCTTCTTCT TGCCACGGCC CACACTGCTC CGCAGGCTGA AGAACTGACC GGAACGCTGA AAAAAATCAA AGAAACCGGC GTTATCACTG TGGGGCATCG GGAATCCTCC GTGCCATTTT CTTACTATGA CCTGCAACAG AACGTCATAG GCTACTCACA AGACTACTCC AACAAGATTG TTGACGCCGT AAAAAAACAG CTCAACATGC CCAACCTGAA AGTGCGCTTT GTACCCATTA CATCGCAAAA CCGCATTCCC CTTCTCCAGA ACGGCACCTA CGATTTCGAA TGTGGCTCTA CCACCAACAA TGCCGACCGC CAGCAGCAAG TCGATTTTTC CAACACCCTC TTCATTGTGG GTACCCGCCT GCTGACCCAC AAGGATTCGG GCATCAAGGA CTTTGACGAC CTCAAGGGCA AAAATGTTGC CGTTACCGCC GGAACCACCT CGGAAATGCT GCTGAACAAG ATGAATGACG AGAAAAAACT CGGCATCAGC ATCATCAGCA CCAAGGACCA CGGCGACTCC TTCCGTACCG TGGAATCCGG CCGTGCCGTA GCCTTTTTCA TTGACGACGC CCTTCTGGCC GGCGAGCGGG CCAAAGCCAA AAAACCCGCC GAATGGGTTA TCGTAGGAAC TCCGCAAAGC TTTGAAGCTT ACGGCTGCAT GCTGCGCAAA GGCGATGCCG CTTTCAAAAA ACTGGCTGAC GATGCCATTG CCGAACTGCA ACTGAACGGC GAAGCTGAAA AGTCCTACAC CCGCTGGTTC AAGCAGCCCA TCCCCCCCAA GGGCATGAAC ATGGATTTTG ACATGTCCGA CGAAATGAAG ACCCTCTTCA AGGCCCCCAA CGACAAGGCC CTGAATTAA
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Protein sequence | MTLKKTLLSA LAALLLLATA HTAPQAEELT GTLKKIKETG VITVGHRESS VPFSYYDLQQ NVIGYSQDYS NKIVDAVKKQ LNMPNLKVRF VPITSQNRIP LLQNGTYDFE CGSTTNNADR QQQVDFSNTL FIVGTRLLTH KDSGIKDFDD LKGKNVAVTA GTTSEMLLNK MNDEKKLGIS IISTKDHGDS FRTVESGRAV AFFIDDALLA GERAKAKKPA EWVIVGTPQS FEAYGCMLRK GDAAFKKLAD DAIAELQLNG EAEKSYTRWF KQPIPPKGMN MDFDMSDEMK TLFKAPNDKA LN
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