Gene Ddes_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1524 
Symbol 
ID7285222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1821546 
End bp1822106 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content50% 
IMG OID643582335 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002480104 
Protein GI220904792 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0215474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACG AAAATTCAAA AGAATATCCC CCGGACCACG CTCCCGGAGT ATACACCCTA 
CATGAACCGG ACCTGAATCC GCCCAAAGAG ACAAAAGCTC AGCTGCTTTT TGAAATTTTT 
TGTGCAGCGA TTTTTTTGGG TATGATCGGC CTGGTTTTTT ATAACGCTTT TCTGCGTTAC 
GTTTTTTCGT CCAGCTATCC TCCCAGTGAG GAATGGGCGC GCTTTCTTTT CATTTACATC 
ACGTTTTTCG GCGCCATCGA AGCTTTTTAC CGCAACAAAC ACATTGCTGT GGACATGTTT 
GTGGTGCTGC TCAAGGGCGC ATCGCGCAAG TATGTTGATA TTACAGCATC ACTTTGCAGC 
ATTTTTGCCT TGGGGCTGCT GCTGTACGGC GGCATCGTCA ACGTGTTGCA GACCATGGAT 
ACCTATTCCG TGGCCACGGA TGTCAATATG GCCTTTATCA ACGGCACCTT GCCCATCATG 
GCCTTTTGCG CCCTGATCTT CCAGCTGCGC TCCCTGGCGG TGCTCATACG CCGTCCGGCA 
GATACCTTCC ATAAGGGATA G
 
Protein sequence
MQNENSKEYP PDHAPGVYTL HEPDLNPPKE TKAQLLFEIF CAAIFLGMIG LVFYNAFLRY 
VFSSSYPPSE EWARFLFIYI TFFGAIEAFY RNKHIAVDMF VVLLKGASRK YVDITASLCS 
IFALGLLLYG GIVNVLQTMD TYSVATDVNM AFINGTLPIM AFCALIFQLR SLAVLIRRPA 
DTFHKG