| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1507 |
|---|
| Symbol | |
|---|
| ID | 7285205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1799444 |
|---|
| End bp | 1800781 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643582318 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_002480087 |
|---|
| Protein GI | 220904775 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGT ATCTGAAAAT TCTTTATGTT CAGGTTTTAA TTGCGATCTG TATCGGCATT
CTGCTTGGAC ACTTTTACCC GCAGTTGGCA GTAAAAATGC AGCCGCTGGG GGCCGGCTTC
ATCAAGCTCA TCAAGATGGT CATTGCCCCG CTGATCTTCT GTACTGTTGT TACCGGTATT
GCGGGCATGC AGGACCTTAA AGCGGTCGGC AAAATCGGCG GGCTCTCTCT TGTCTATTTC
ATGACCATGA CTACGCTGGC CCTTATAATA GGCATGGTCG TCGTTAATAT CGCGCAGCCG
GGCGTGGGCA TGAATATTGA CGTCAACACG TTTGACGCCA GCGCCAAGGG ACTCGCCGAC
CAGTATGCCA GCAAGGCCAA AGATCAGACG CTCGCGGCCT TTTTGATGAA TATCATCCCC
AGCACCTTTG TTTCTGCCTT TACCAGCGGC GAAATACTCC AGGTTCTGAT GATAGCCATC
CTTTTCGCCT TTGCCCTGAA TTTCAGTGGG GAAAAGGGGC AGTTGGTGCT TGATTTCGTC
AAAAGTTTTT CCGAAGCGCT TTTCAAGCTG ATCAACATCA TCATGCGCGT CGCTCCCGTG
GGCGCATTCG GCGCAATGGC CTTCACCATC GGGAAAGAGG GACTCGGCTC TGTCGTCTCC
CTGGGTGAGC TGATCCTCTG TTTCTATCTC ACCAGCCTTC TTTTCGTCAT TCTCGTCCTC
GGCGCTGTGG CCACCTATTC CGGCTTCAAT ATTTTCAAAT TCATCCGCTA TATCAAAGAG
GAACTGCTCA TTGTGCTCGG CACGTCTTCC TCAGAATCCG TTTTGCCCAA CATGCTCTAC
AAAATGGAAA AAGCGGGCTG TCAAAAGAGC GTGGTCGATC TTGTCATCCC CACCGGCTAT
TCCTTCAACC TTGACGGAAC GGCCATATAC CTGACCATGG CAGCCATATT TCTGGCGCAG
GCCACCAACA CCGCTCTGAC CACAGCCGAC CAGCTCACAC TGCTCATCAT CCTCATCATC
TCTTCCAAGG GTGCTGCGGC GGTTACTGGC GGCGGCTTTA TCGTACTTGC CGGATCCATA
AGCTCCGTAA GCAGCATTCC CCCGGAAAGC CTTGCCATCA TCTTCGGCAT CGACCGCTTC
ATGTCCGAGG CGCGCGCGCT GACCAATCTG GTCGGCAACG GCGTGGCCTC CATCACCATT
GCCAAAATAA CCGGCAAACT TGATCAGGAG CAGCTGCGCC GGGAACTGGA CAAAGTCCCC
GGACAGACAC AGACGATTGT AGACGAAGAT ATGGGCGAAA GCCCGGCAGC TATGCGCGAA
ACAAGCATGA CTTCGTAA
|
|---|
| Protein sequence | MLKYLKILYV QVLIAICIGI LLGHFYPQLA VKMQPLGAGF IKLIKMVIAP LIFCTVVTGI
AGMQDLKAVG KIGGLSLVYF MTMTTLALII GMVVVNIAQP GVGMNIDVNT FDASAKGLAD
QYASKAKDQT LAAFLMNIIP STFVSAFTSG EILQVLMIAI LFAFALNFSG EKGQLVLDFV
KSFSEALFKL INIIMRVAPV GAFGAMAFTI GKEGLGSVVS LGELILCFYL TSLLFVILVL
GAVATYSGFN IFKFIRYIKE ELLIVLGTSS SESVLPNMLY KMEKAGCQKS VVDLVIPTGY
SFNLDGTAIY LTMAAIFLAQ ATNTALTTAD QLTLLIILII SSKGAAAVTG GGFIVLAGSI
SSVSSIPPES LAIIFGIDRF MSEARALTNL VGNGVASITI AKITGKLDQE QLRRELDKVP
GQTQTIVDED MGESPAAMRE TSMTS
|
|---|
| |