Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1478 |
Symbol | |
ID | 7285176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1768920 |
End bp | 1770050 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643582289 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002480058 |
Protein GI | 220904746 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GTATAACCTT GCTTGCGGCA ATGGCACTCT GCGCGGTTCT GGCCGCCCCC GCTCAGGCGG AAGACACCAT CAAAATCGGT GTCGCCGGTG CTCACTCCGG CGATCTGGCC TCCTACGGCG TACCCAGCCT AAACGCTGCC AAGGTGGTCA TTGCCGATGT CAACGCCAAG GGCGGCATAC TCGGCAAGCA GGTCGAACTG GTAGCCCAGG ATGACCAGTG CAAACCCGAA CTGGCTACCA ACGCGGCCAC CAAGCTCATC TCCGACAAGG TGGCTGTGGT GATGGGGCAT ATCTGCTCCG GCGCCACCAA GGCCACACTG CCCCTGTATA CCGATGCCAA AATCGTGAGC ATGTCGCCCT CTGCCACCAC TCCCGGTCTC ACCGAAGACG GCAACAACCC GTACTTCTTC CGCACCATCG CCAATGACAA GGCCCAGGCC AGGTTGACCA GCGACTTCAT GCTCAACAAC CTCAAGGTCA AAAAGGTTGC CTATCTGCAT GATAACGGCG ACTACGGCAA AGGCTTTGTG GACAATAACC GCGAGCACCT CGAAAAGGCT GGCGTCAAAA CAGTTCTGTT TGAAGCCATT ACCCCCGATG CCGTGGACTT TTCCGCTGTT GTGCGCAAAC TGAGACGCGA ACAGCCCGAC ATCGTGGTTT TCGGCGGGTA TCAGCCCACG GCCTCCAAGC TGTTGCAGCA GATGCGTCGC GACCGCGTGA CCACCGCCCT GCTCGGCCCT GACGGGCTTA TGGACGAGGC CTTCATCAAG ATGGCCGGCA AGGCCAGCGA AGGCGTGTAC TCTTCCTACC CCAAAGACAC CAGCAATCTG CCCGCTTACA GGGCCGCCCG TGAAGGCCAC GTAAAGATGT TCGGCAAGGA TCCCGGCTCG TTCTACTACA ACGGCTATGC CGCCACCCAG GCTCTGGTCA ATGCCATTGA AAAGGCCGGC AGCACCGACA CAGCCAAGGT TGTGGATGCC CTGCGCTCCG CACCTGTGGA TACCCCGCTG GGCACCCTGA CTTTCAGCAA AACCGGCGAT GCCGCCGGCA TGGCTCTTTC CATCTATCAG GTCAAAGACG GAAAATTTGT GGAACTCGAC CACAGCATCG TCCTTGAGTA G
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Protein sequence | MKKGITLLAA MALCAVLAAP AQAEDTIKIG VAGAHSGDLA SYGVPSLNAA KVVIADVNAK GGILGKQVEL VAQDDQCKPE LATNAATKLI SDKVAVVMGH ICSGATKATL PLYTDAKIVS MSPSATTPGL TEDGNNPYFF RTIANDKAQA RLTSDFMLNN LKVKKVAYLH DNGDYGKGFV DNNREHLEKA GVKTVLFEAI TPDAVDFSAV VRKLRREQPD IVVFGGYQPT ASKLLQQMRR DRVTTALLGP DGLMDEAFIK MAGKASEGVY SSYPKDTSNL PAYRAAREGH VKMFGKDPGS FYYNGYAATQ ALVNAIEKAG STDTAKVVDA LRSAPVDTPL GTLTFSKTGD AAGMALSIYQ VKDGKFVELD HSIVLE
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