Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1456 |
Symbol | rho |
ID | 7285153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1744049 |
End bp | 1745344 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643582266 |
Product | transcription termination factor Rho |
Protein accession | YP_002480036 |
Protein GI | 220904724 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00134709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAAA AGAAAGCTAC CCCCACACTG TTGACAGACA GCGCCCTGAG CCTCACTGAC CTGAAGACCC GCAGCATGCA GGAACTCATG GATCTGGCTG AACAGTACGA GATTGAGAAT GCCAGTTCCA TGCGAAAGCA AGAGCTTATC TTCGCACTGC TTTCCACCTG CGCCTCGCAG AACGGTGCCA TCTACGGCGA CGGCGTGCTG GAGATACTGC CGGATGGCTT TGGCTTTCTG CGCTCGCCCC TTTGCAGCTA CATGCCGGGA CCAGACGACA TATATGTGTC GCCATCGCAA ATCCGACGCT TCTCCCTGCG TAAAGGTGAC ATTGTTTCCG GGCAGATCCG CCCGCCCAAG GAAGGGGAGC GCTACTTCGC CCTGCTGAAG GTTACCGAGA TCGGCTTTGA ACCGCCGGAA CATGCCAAAA ATCTCGTCCT GTTTGACAAC CTTACCCCCA TCTACCCCGA CCATCAGCTC GTCATGGAAA ATGGCGAGAA AAATCTTTCC AACCGCGTCA TCGACATCAT GGCCCCCATT GGTCGTGGTC AGCGCGGCCT TATTGTTGCC CCCCCCCGCA CAGGCAAAAC CATTCTGCTC CAATCGCTTG CCAATGCCAT CAACGCCAAT AATCCGGAAG TCTACCTTAT CGTGCTGCTG ATTGACGAGC GCCCCGAGGA AGTGACGGAT ATGGAACGTA CGGTCAAAAA GGCCGAAGTA ATCAGTTCCA CGTTTGACGA GCCGCCGCAG CGCCATGTGC AGGTCTGTGA AATGGTGCTT GAAAAGGCCA AACGCCTTGT AGAACGCAAG CGCGATGTTG TTATCCTGCT TGACTCGATC ACCCGCCTTG GCAGGGCCTA CAACGCCGTA ACCCCCTCGT CCGGGCGTGT ACTTTCCGGT GGGCTGGACG CCAACGCCCT GCAGCGGCCC AAACGCTTTT TCGGTGCGGC CCGTAACATC GAAGAAGGCG GCAGCCTGAC CATTATCGCT ACCGCCCTGA TTGATACCGG TTCACGCATG GACGAAGTAA TCTTTGAAGA GTTCAAGGGT ACAGGCAATA TGGAAATCTA CCTGGACCGC CATCTTTCGG AAAAGCGCGT GTTCCCTGCC ATCGATATCA ACCGCACCGG CACCCGCAAG GAAGACCTGC TGCTGCCCGA AGACGTGCTC AACCGCGTCT GGATACTGCG CAAGATTCTG GCCCCCATGT CTGCCATTGA CAGTATGGAA TTCCTGCTGG ACAAGATGCG CGGCACCAAA TCCAATAAAG ACTTTATGAA CGCCATGGGC AAATAG
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Protein sequence | MRKKKATPTL LTDSALSLTD LKTRSMQELM DLAEQYEIEN ASSMRKQELI FALLSTCASQ NGAIYGDGVL EILPDGFGFL RSPLCSYMPG PDDIYVSPSQ IRRFSLRKGD IVSGQIRPPK EGERYFALLK VTEIGFEPPE HAKNLVLFDN LTPIYPDHQL VMENGEKNLS NRVIDIMAPI GRGQRGLIVA PPRTGKTILL QSLANAINAN NPEVYLIVLL IDERPEEVTD MERTVKKAEV ISSTFDEPPQ RHVQVCEMVL EKAKRLVERK RDVVILLDSI TRLGRAYNAV TPSSGRVLSG GLDANALQRP KRFFGAARNI EEGGSLTIIA TALIDTGSRM DEVIFEEFKG TGNMEIYLDR HLSEKRVFPA IDINRTGTRK EDLLLPEDVL NRVWILRKIL APMSAIDSME FLLDKMRGTK SNKDFMNAMG K
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