| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1443 |
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| Symbol | |
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| ID | 7285139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1729654 |
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| End bp | 1730955 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643582252 |
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| Product | putative RNA polymerase, sigma 70 family subunit |
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| Protein accession | YP_002480023 |
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| Protein GI | 220904711 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000239959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ATAGCAAGAT AGCCCCGAGC AAAACCAAGG GCGCCGCAGC AGCGGAAAAA
AGCAGAAAAA CCACGCTTCC GGTGGAGGTT GTCGGGCCTG AAGATGCCCC CAGGCAGCCC
TCTGCGGCTG CCGGAAAAAC ACGAACCCGC GTTGCCGCAG ACACTGCCGC CAAAACATCC
GCCGGGAACG CCGGCAAAAG CCGAAAAAAA GAAACGTCTT CAGCTCTTGA GCCCGACGAT
GGCAGCCGCA GCTCCGGCAC GGTGCTGGAT GTGGACGAAC TTGAACATGA GCGCGATACG
GACGAGCTTG ATATCGAATC GCCCGACAGC GAAGAAGAAC TGCTCGACTC CGACATGGAC
GAAGACGATG AGCCGCGCCT GACAGATGAA GATGAACAGG ACCGCAGCGT TCCCGCGCCC
TCTTCTTCAC GGGTGCCTGC CGTGGGTACT CGCGACAGCC TGCACCTGTA TCTTCGCGAA
GTAAGCCGCT TCCCCATGCT TAAACCCGAA GAGGAGCATG AACTGGCTGT GCGCGTGCGC
GATCATAATG ATGCGGACGC CGCCTTTCGC CTGGTTTCAT CCCACCTGCG GCTGGTCGTG
CGCATCGCCA TGGATTTTCA GCGCCGCTGG ATGCAGAATG TGCTTGACCT TGTGCAAGAA
GGAAATGTGG GCCTCATGCG CGCGGTCAAC AAGTTTGACC CCGACAAGGG CATCAAGTTT
TCCTATTATG CCTCGTTCTG GATCAAAGCC TATATTCTCA AGTTCATCAT GGACAACTGG
CGCATGGTCA AGATCGGCAC GACCCAGGTG CAGCGCAAGC TGTTCTACAA CCTGAACAGA
GAACGCCAGA AGCTCATCAT GCAGGGCTAC GACCCGGATG CCGCCATGCT TTCGGAACGC
CTGGGCGTAA CCGAAGAGCA GATAAATGAA ATGGACCAGC GCCTTGCCTC TACAGACATG
TCGCTTAACG CCCAGGTGGG CGAAGATTCT GGCGGCGCCA CCCGCATGGA CTTTCTGCCA
GCCCTGGGAC CAGGGATCGA AGACAGTCTG GCATCTACGG AAATAGCGGG AATTGTGCGC
TCAAAGCTGA AAACCATCAT GCCGAAGCTC AACGAGAAAG AACAGTATAT CCTGCACAAC
AGGCTGCTTT CTGACGAGCC GATCACCTTG CGTGAGATAG GCGAACGGTA TAACATCACA
AGAGAAAGAG TGCGCCAGCT TGAGGCGCGC CTGGTGGAAA AAATTGGCCA GCACATGAAA
AATGACATCG AAGACTTCTC CGATCACTGG ATTCAATCCT AG
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| Protein sequence | MKKNSKIAPS KTKGAAAAEK SRKTTLPVEV VGPEDAPRQP SAAAGKTRTR VAADTAAKTS
AGNAGKSRKK ETSSALEPDD GSRSSGTVLD VDELEHERDT DELDIESPDS EEELLDSDMD
EDDEPRLTDE DEQDRSVPAP SSSRVPAVGT RDSLHLYLRE VSRFPMLKPE EEHELAVRVR
DHNDADAAFR LVSSHLRLVV RIAMDFQRRW MQNVLDLVQE GNVGLMRAVN KFDPDKGIKF
SYYASFWIKA YILKFIMDNW RMVKIGTTQV QRKLFYNLNR ERQKLIMQGY DPDAAMLSER
LGVTEEQINE MDQRLASTDM SLNAQVGEDS GGATRMDFLP ALGPGIEDSL ASTEIAGIVR
SKLKTIMPKL NEKEQYILHN RLLSDEPITL REIGERYNIT RERVRQLEAR LVEKIGQHMK
NDIEDFSDHW IQS
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