Gene Ddes_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1278 
Symbol 
ID7284970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1506703 
End bp1507560 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content56% 
IMG OID643582084 
Productprotein of unknown function DUF191 
Protein accessionYP_002479859 
Protein GI220904547 
COG category[R] General function prediction only 
COG ID[COG2107] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAG CTTTTCCACA AAACGGTTTC CAGTCTTTAG GGTTGGGGCT TTCGCCCTGT 
CCCAATGACA CCTATATTTT TCACGCTCTT CTGCACGGCC TTGTACCGGC CCCGGCAGCT
CTGAAACCCC ATATGGCTGA TGTGGAAGAA CTGAATACCC TTGCCCGTCG GGGACAGCTT
GAGGTGACCA AGATATCCCT TGGTGTGGTA GCTGAAATTA TGGATAGCTA CGCCCTGCTG
TCTTCCGGCG CTGCACTTGG CTGGGGATGC GGACCACTGG TTGTTGCGCG AAAAAAACTT
TCGCCCCAGG AATGGAGAAA CGCCACTGTG GCAGTGCCGG GGGTGTTGAC CACTGCCAAC
CTTCTGCTTA CCTTGCATGG CGGTTTTCAA GGGGCACGGC GCGAAATGCT TTTCAGCGAT
GTGATGCCCG CCGTGGCGCG GGGTGAAGCG GACATGGGGC TTGTTATTCA TGAGGGGCGC
TTTACTTACG AAAAACTGGG TTTGACCAGG GTGCTTGATC TGGGCCAATG GTGGGAAAGC
GAATTTCATT TGCCCCTGCC GCTGGGAGCC ATTGCTGTGC GGCGTGATGT GCCGTTGCCG
CTCGCGCGGC GCGTACAGGG AGCCATTACC GGCAGCCTGG CACACGCCAA CGCGCACCCC
GAAGCCTCAA GGCAGTACGT GTGCGCACAT GCGCAGGAAA TGACAGACAG CGTTACACAG
GCACATATCA AAACATTTGT GACGAATTTC AGCCTTGACC TTGGTGGTGA AGGGCGTAGG
GCCATCGAGC ATCTTGTAGG TCGGGCTGCG GAGCTTTCAG GAAAAAAACT GCCGGCGGAA
GGGCTGTTTT TACGCTAA
 
Protein sequence
MSSAFPQNGF QSLGLGLSPC PNDTYIFHAL LHGLVPAPAA LKPHMADVEE LNTLARRGQL 
EVTKISLGVV AEIMDSYALL SSGAALGWGC GPLVVARKKL SPQEWRNATV AVPGVLTTAN
LLLTLHGGFQ GARREMLFSD VMPAVARGEA DMGLVIHEGR FTYEKLGLTR VLDLGQWWES
EFHLPLPLGA IAVRRDVPLP LARRVQGAIT GSLAHANAHP EASRQYVCAH AQEMTDSVTQ
AHIKTFVTNF SLDLGGEGRR AIEHLVGRAA ELSGKKLPAE GLFLR