Gene Ddes_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1242 
Symbol 
ID7284925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1456569 
End bp1457141 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content53% 
IMG OID643582040 
Productelectron transport complex, RnfABCDGE type, A subunit 
Protein accessionYP_002479823 
Protein GI220904511 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.932165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTT TCGCCATCTT TATCTCGGCC ATCTTCGTAA ACAATATTGT GTTGGCCCAG 
TATCTCGGCA ACTGCCCGTA TGTGGGATGC TCTAAAGAAA AAGGCGTAGC CCTCGGCATG 
GGTGGCGCGG TAGTTTTTGT AACCATTGCC GCCACGCTTT GCACTTGGCT CATGCAGAAA 
TATGTGCTCG ACCCCTACGG GCTGGGGTAT CTGCAAACCA TCGTTTTTAT CGTTGTCATC 
GCGGCATTGG TGCAGTTTGT TGAAATGTTT CTCAAAAAAA TTGTGCCGCC GCTTTACGCC 
GCCCTGGGTA TTTTTTTGCC GCTCATTACC ACCAACTGCG CGGTTATGGG GGTTGCCATT 
CTGGTACAGC GTGAAGGCTA TGGTTTGATG GAATCTCTGG TATGGGCGCT GGCCTACGGC 
CTGGGATTCA CTCTGGCGCT GCTGCTGATG GCAGCCATCC GCGAAAGGCT GGACACCTGT 
CGTCTGCCCA AGGCCATGGC CGGTACGCCG CTGGCTCTTG TTATGGCTGG CCTTATGTCA 
CTGGCTTTCA TGGGCTTTAA AGGAATGGGA TAA
 
Protein sequence
MDIFAIFISA IFVNNIVLAQ YLGNCPYVGC SKEKGVALGM GGAVVFVTIA ATLCTWLMQK 
YVLDPYGLGY LQTIVFIVVI AALVQFVEMF LKKIVPPLYA ALGIFLPLIT TNCAVMGVAI 
LVQREGYGLM ESLVWALAYG LGFTLALLLM AAIRERLDTC RLPKAMAGTP LALVMAGLMS 
LAFMGFKGMG