Gene Ddes_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1198 
Symbol 
ID7284880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1409937 
End bp1411022 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID643581997 
Productmetalloendopeptidase, glycoprotease family 
Protein accessionYP_002479780 
Protein GI220904468 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00132494 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGCC TTGGCATTGA AAGTTCCTGT GACGAAACCG CGCTGGCCTT GGTGGAAGAT 
GGCCGCCTGC TGCATTCTGT ATTGTCCACC CAGGCTGATA TGCACGCACT GTTTGGCGGT 
GTTGTGCCCG AGCTGGCATC CCGCGAGCAT TATCGTTATA TCGGCCCCCT GTTTGACGAA 
TTGATGCGGC GTAGCGACAA GAGTAATGAA GAAATCGACC TTGTAGCTGT CGCGCGTGGG 
CCGGGGCTGC TTGGCAGTCT GCTGGTGGGT GTGGCCTTTG CCAAGGGGCT TGCTTTCAGT 
CTGGGGGCAC GTTTTCTCGG TGTCAATCAT TTACAGGCGC ATCTACTGGC AGCCGGGCTG 
GAGCAACCTT TGAAGTTTCC GGCTTTGGGA CTGCTGGTTT CCGGCGGGCA TACGCACCTG 
TATCGCATGG AAACCCCGTG GAACTGTCTG CCCCTTGGGC GCACCTTGGA CGACGCGGCG 
GGAGAGGCCT TTGACAAGGT CGGTAAGGTG CTTGGCCTGG CCTATCCAGG AGGACGCCTT 
ATGGACGCTC TTGCCGGAGA AGGGCGGGCG GATGGAATTG CCTTTCCACG TCCCTATCTG 
GACAATGACA ACCTGGATTT CAGCTTCAGC GGATTGAAAA CTGCCGCCAG TACCTATGTA 
CAACAACATT TTGCGGGCAT GACATGGCCG CGCCCTTTGG GTTCGACGGC GGCCGCGCCG 
CAAGAACTGA AAGATTGTTG CGCCGCCTTT AATCTGGCCG TGGTGGATAC CCTTTGCACA 
AAGGCTACGA GAGCACTGGA CAGAAATCCG CAGTTGAAAT ATTTGATTCT TGCGGGCGGC 
GTTGCCTGCA ACTCGTTGTT GCGCCAGCGC GTTACGGAAC TGATGGAGCG CAGAGGCGGT 
CAGGCCATCA TTCCCGGCCC GCATTTATGC ACGGACAATG CGGCCATGAT TGCCTATGCG 
GGCTGGTTGC TCGGAAAAGA AGGATATTAC CACCAATTAA ACATGGAAAC CGTACCCCGC 
GGGCGCGCCC TGCCTGACGA TATGAGGCGC TGCCGGGAAT ACGCTGAAGA CCTGTCAGAA 
ACATGA
 
Protein sequence
MLCLGIESSC DETALALVED GRLLHSVLST QADMHALFGG VVPELASREH YRYIGPLFDE 
LMRRSDKSNE EIDLVAVARG PGLLGSLLVG VAFAKGLAFS LGARFLGVNH LQAHLLAAGL 
EQPLKFPALG LLVSGGHTHL YRMETPWNCL PLGRTLDDAA GEAFDKVGKV LGLAYPGGRL 
MDALAGEGRA DGIAFPRPYL DNDNLDFSFS GLKTAASTYV QQHFAGMTWP RPLGSTAAAP 
QELKDCCAAF NLAVVDTLCT KATRALDRNP QLKYLILAGG VACNSLLRQR VTELMERRGG 
QAIIPGPHLC TDNAAMIAYA GWLLGKEGYY HQLNMETVPR GRALPDDMRR CREYAEDLSE 
T