Gene Ddes_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1159 
Symbol 
ID7284841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1367999 
End bp1368706 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID643581958 
ProductHhH-GPD family protein 
Protein accessionYP_002479741 
Protein GI220904429 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000451555 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAATA CACATTATTT TGAATATGGC GAAAAAGAAA AATCATGGCT TAAGTCGCGC 
GATCCGGTGC TGGCCGCCGC TATGGAAGAA ATCGGACACA TCCGGCGCGA AGTTACGCCG
GACATTTTCA ACGCGCTTTT AAATTCCATC GTAGGGCAAC AGATATCAAC AAAGGCACAG
GCCACCATCT GGAAGCGCAT GCGGGAGCAG TTCTGCCCCA TAACACCGGA AAACATAGGA
ACAATAAGCG CGGAAAGCCT GCAAACCTGC GGCATATCCA TGCGTAAGGC GGCCTATATC
AAGAGTATTA CCGAAGCTGT GCTGGATGGA AGCCTGGATC TTGCCCGCCT GCCCTCCCTG
ACTGACAAGG AGATTTGCGC TCAACTGGTG CAGTTGAAAG GCATAGGTGT ATGGACTGCG
GAAATGATCA TGATTTTTTC CATGCAGCGG CCGGATATCC TGAGCTGGGA TGATCTGGCA
ATTCAGCGTG GCCTGCGCAT GCTGTACAGG CATCGCCAGA TTACTCCCGC ACTCTTTGCC
AGATACAGAA AGCGCTATTC CCCCCATGCG ACCACAGCCA GCCTGTATTT GTGGGCTATA
GCCGGGGGAG CGTGCGCCGA ACTTAAAGAC TGCGCGCCGC TAAAAAAGAA AACCAAGCCT
GCAAAGCGGC AACCGGTCAA AGCACAGGAC AAACAGAACA CACAGTAA
 
Protein sequence
MPNTHYFEYG EKEKSWLKSR DPVLAAAMEE IGHIRREVTP DIFNALLNSI VGQQISTKAQ 
ATIWKRMREQ FCPITPENIG TISAESLQTC GISMRKAAYI KSITEAVLDG SLDLARLPSL
TDKEICAQLV QLKGIGVWTA EMIMIFSMQR PDILSWDDLA IQRGLRMLYR HRQITPALFA
RYRKRYSPHA TTASLYLWAI AGGACAELKD CAPLKKKTKP AKRQPVKAQD KQNTQ