Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1108 |
Symbol | |
ID | 7284790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1300088 |
End bp | 1301542 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643581908 |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_002479691 |
Protein GI | 220904379 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGG AATTTGCGGC ACTGCTGGAT GAGTGCGGAC GCGGCGAGAT TGAAGTGCGC GCAGACTCGC GTCAGGTATG TCCCGGCGAT ATTTTTGTGG CTGTACCTGG CGTCAGGGAA GACGGCGCCC AGTTTATCCC TGCTGCCGCT GAAGCCGGGG CGGGAGTCAT TGTTTGCCGG GCCGACAGTG AAGAGGCTGC AGCTGCAGCG ACCGCCGGGT GCAGGGTCGT CCACCATGCC GATCCGCGTG AGGCGCTCTG GCGGCTGGCA CAGGCCCGCT GGCATACAGA TACCTTGCCT ATCCGTATTG TGGGTGTTAC AGGCACCAAC GGCAAAACCA CCTGCACCTA TCTGCTTGAA CGCCTTTTCG CCCAGGCAGG GCATAAGCTC GGCGTGATGG GAACAGTGAG CTATCGCTGG CCCGGCCATG TTGAGGCGGC CCCCCTGACC ACTCCTGATG CCTTGAGCGT GCATGCCATG CTGGCCGCAA TGGCCCGCGA TGGCGTGGAC GTGGCCGTGA TGGAAGTCTC CTCTCATGCC ATAGACCAGC AGCGGGTGTG CGGTGTGCCG TTTTCCGGCG CGGCCTTCAC CAACCTGAGC CAGGATCATC TCGATTATCA TCGGGATATG GAAAGTTATT TTCAGGCCAA GGCCAGGCTT TTTCTTGAGC TGCCGCGCGC CGACAAATCC ATGGCCGTCA ATGCTGACGA TGCCTGGGGC CGGCGCCTGC TGGAGCTGTG TCCCACGGCT CTTTCCTTCG GTCTGCAAAA GGGTGCGCCC AACAGGCGGC ACCTGTGGGG AGAGCTGCTT TCTTCCACCA CAGCAGGCTG TCATCTGCGT ATGAGCCTTG AAGACATGCA GTGGGAGCTA CGCTCTCCCC TTGTGGGGGC TTTCAATGCT TCCAACCTGC TGGCTGTGCA GGCTGTGGCT CTGGAAATGG GAATTGATCC TGAAGCCTTC AAGGCTCTTG AAAGCTTTAC GGGGGTCAGC GGCAGGCTGG AGCGGGTGGA AAATCCGCAA GGACTCAATG TTTTTGTGGA TTATGCCCAT ACTCCCGATG CACTTGAGAA TGTTCTCAAG GCCCTGCGCG ATGCAGGCTT TGAACGCGTG ATCACTGTTT TTGGCTGTGG CGGTAACCGT GACCGCAGCA AGAGACCCAT CATGGGAGAA GCTGTGGCCC GCTGGTCGGA CGTGGCCGTG CTGACCTCGG ACAATCCGCG GTTTGAAGAT CCGGAGGCCA TACTCAAGGA TGTGTTGCCT GGCCTTGCAG ATGCCAAAGA GGTTGTCGTC GAGGTTGACC GTCGCGAGGC CACCACCCGG GCTTTGGGCA TGCTTGGCAA AAAAGATGCG TTGCTTATTG CCGGCAAAGG GCATGAAGAC TACCAGATTA TTCAGGGGGT TAAACACCAT TACAGCGATC AGGAAGTGGT GCGGGAGATA CTCCGGTGCG CATAA
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Protein sequence | MNREFAALLD ECGRGEIEVR ADSRQVCPGD IFVAVPGVRE DGAQFIPAAA EAGAGVIVCR ADSEEAAAAA TAGCRVVHHA DPREALWRLA QARWHTDTLP IRIVGVTGTN GKTTCTYLLE RLFAQAGHKL GVMGTVSYRW PGHVEAAPLT TPDALSVHAM LAAMARDGVD VAVMEVSSHA IDQQRVCGVP FSGAAFTNLS QDHLDYHRDM ESYFQAKARL FLELPRADKS MAVNADDAWG RRLLELCPTA LSFGLQKGAP NRRHLWGELL SSTTAGCHLR MSLEDMQWEL RSPLVGAFNA SNLLAVQAVA LEMGIDPEAF KALESFTGVS GRLERVENPQ GLNVFVDYAH TPDALENVLK ALRDAGFERV ITVFGCGGNR DRSKRPIMGE AVARWSDVAV LTSDNPRFED PEAILKDVLP GLADAKEVVV EVDRREATTR ALGMLGKKDA LLIAGKGHED YQIIQGVKHH YSDQEVVREI LRCA
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