| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1080 |
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| Symbol | |
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| ID | 7284762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1265913 |
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| End bp | 1266569 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643581881 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002479664 |
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| Protein GI | 220904352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00830882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGTCT TTTTCTTTGA CCTGGACGGT ACCCTGCTTG ATACGCTTGG CGATATCGGC
AATGCCTGCA ATGCCGTACT GGCCCGGCAC GGTTACCCCA CGCACCCTCT GGCGGACTAC
AGACGCTTTG TGGGACGGGG CTTTGACAAG CTGGTACGCG ACACCCTGCC TGCCGCAGCA
GAGCTTGAGC CGCCGGCCCT GACACAACTG GTGGAAGAAA CCCGCCAGCA CTACGGCCGC
CATATGTGCG ACACCACCCG CCCCTATGAA GGCATCATCC CGGCACTGGA AACCCTGGCC
GCCAAGGGAT GCCCGCTGGC CGTGCTTTCC AACAAGCCGG AAGAACATAC GGTGGATCTG
GTGCAGCGCT ACTTTCCTTC CATCCCCTTC GTTCTTGTAC GCGGCGGCAG AAAAAATGTT
CCTCTTAAAC CACAGCCGCA GGCCCTGCTG GACATGGCTG AAACAATGCA TACTTCTGTG
GCCCGGGTCC TGTACGTGGG CGACAGCGAC GTGGATGTGC AGACCGCGCG CAACGCGGGC
ACAACGTCAG TGGGTGTGGC CTGGGGTTTT CGCGGCCCTG CGGAACTGCG CGCCGCTGGA
GCCGATCATA TCATCGACGC CCCGGCCCAA CTGATTGAAC TGACGGTGGA GATATAG
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| Protein sequence | MRVFFFDLDG TLLDTLGDIG NACNAVLARH GYPTHPLADY RRFVGRGFDK LVRDTLPAAA
ELEPPALTQL VEETRQHYGR HMCDTTRPYE GIIPALETLA AKGCPLAVLS NKPEEHTVDL
VQRYFPSIPF VLVRGGRKNV PLKPQPQALL DMAETMHTSV ARVLYVGDSD VDVQTARNAG
TTSVGVAWGF RGPAELRAAG ADHIIDAPAQ LIELTVEI
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