| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1038 |
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| Symbol | |
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| ID | 7284719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1213853 |
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| End bp | 1215529 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643581839 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002479623 |
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| Protein GI | 220904311 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.368471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG TCACTAAAAC GCCCCGGAGC AATTACACCG GTCCCATTGT GGTGGATCCG
CTGACCCGCA TCGAAGGCCA TCTGCGTATT GAAGTGGAAG TTGAAGGCGG CGTGATCAAA
GAGGCCCGCA GCTGCGCCAC CCTCTTCCGT GGAATTGAAA CCATTCTTAA AGGTCGCGAT
CCCCGCGATG CGCAACACTT CACCCAGCGT ACCTGTGGCG TCTGCACCTA TACCCACGCC
CTGGCCTCCA CACGCTGCCT TGAAGACGCC ATCAACAAGC CCATTCCGGC CAACGCTACC
TATATCCGCA ACCTGGTTCT GGGCAACCAG TTCATGCACG ACCACCTGGT CCACTTCTAC
CACCTCCACG CATTGGACTT TGTGGACGTT ACGAGCGCCC TTCTGGCCGA TCCCGCCAAG
GCAGCCAAGC TGGCGAACTC CATTTCGCCC CGCAAGGCAA CTACTGAAGA GTTTGCCGCC
GTACAGGCAA AACTGAAGAC CTTTGTGGCA AGCGGGCAGC TTGGCCCCTT CACCAACGCC
TACTTTCTGG GCGGGCACGA AGGGTACTAT ATGGACCCCG AAGCCAACCT TGTGTGCACC
GCCCACTACC TGCAGGCCCT GCGCGCCCAG GTGGAAGTGG CCAAGGGCAT GGCCGTTTTC
GGCGCCAAGA ACCCGCACAC CCAGTTCACT GTTGCCGGTG GCGTGACCTG CTATGAAGCC
CTGACACCCG AACGCATCAA GCAGTTCCGT GAACTTTATG TCAAAGCCCG TGCCTTTATT
GAAGAAGTTT ACATCCCTGA CCTTCTGCTG GTAGCCAGTT ACTACAAGGA TTGGGGTAAA
ATCGGCGGAA CCAACAACTT CATGGCCTTT GGCGAGTTTC CCGCTCCCGG CGGCGAACGC
GACCTCAACA GCCGCTGGTA CAAGCCTGGC GTTATCTATG ACCGCAAGGT GGGTTCTGTG
CAGCCCTTCG ATCCCAGCAA GATCGAAGAG CACGTGCGCC ATAGCTGGTA CGAGGGCAAA
GCCCGTGCTC CCTTTGAAGG CGAGACCAAT CCGCACTTTA CCTTTATGGG CGACACGGAC
AAGTATTCGT GGAACAAGGC TCCGCGCTAT GACGGCCACG CCGTGGAAAC CGGCCCCCTT
GCCCAGATGC TGGTGGCCTA CGGGCACAAC CACAAAACCA TCAAGCCCAC CATTGACGCA
GTGCTCGGCA AGCTGAATCT CGGCCCCGAA GCGCTGTTCT CTACCTTGGG CCGTACTGCC
GCCCGCGGCA TACAGACGCT GGTCATTGCC CAGCAGATGG AAAACTGGCT TAACGAATAC
GAGAATAACA TCGTCAAGGA CAAACAGATC GTTGAAGATT ACGCCGTACC GACTTCCGCA
CGCGGTGTTG GCTTTGCCGA CGTTTCACGT GGCGGTCTCT CACACTGGAT GACCATTGAA
GACGGCAAGA TCGACAACTT CCAGCTTGTG GTTCCCACCA CCTGGAACCT GGGTCCCCGG
GACGACAAGG GAGTGCCCAG CGCTGCCGAA GCCGCCCTGG TCGGCACTCC TGTGGCCGAT
CCCAAGCGCC CGGTAGAAAT CCTGCGCACC ATTCACTCCT TTGACCCCTG CATCGCCTGT
TCTGTGCACG TCATTGATGG TGAAAGCAAC GAAGTGCATG ACTACAAGGT TCTGTAG
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| Protein sequence | MSQVTKTPRS NYTGPIVVDP LTRIEGHLRI EVEVEGGVIK EARSCATLFR GIETILKGRD
PRDAQHFTQR TCGVCTYTHA LASTRCLEDA INKPIPANAT YIRNLVLGNQ FMHDHLVHFY
HLHALDFVDV TSALLADPAK AAKLANSISP RKATTEEFAA VQAKLKTFVA SGQLGPFTNA
YFLGGHEGYY MDPEANLVCT AHYLQALRAQ VEVAKGMAVF GAKNPHTQFT VAGGVTCYEA
LTPERIKQFR ELYVKARAFI EEVYIPDLLL VASYYKDWGK IGGTNNFMAF GEFPAPGGER
DLNSRWYKPG VIYDRKVGSV QPFDPSKIEE HVRHSWYEGK ARAPFEGETN PHFTFMGDTD
KYSWNKAPRY DGHAVETGPL AQMLVAYGHN HKTIKPTIDA VLGKLNLGPE ALFSTLGRTA
ARGIQTLVIA QQMENWLNEY ENNIVKDKQI VEDYAVPTSA RGVGFADVSR GGLSHWMTIE
DGKIDNFQLV VPTTWNLGPR DDKGVPSAAE AALVGTPVAD PKRPVEILRT IHSFDPCIAC
SVHVIDGESN EVHDYKVL
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