| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1032 |
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| Symbol | |
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| ID | 7284713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1207870 |
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| End bp | 1209504 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643581833 |
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| Product | nickel ABC transporter, periplasmic nickel-binding protein |
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| Protein accession | YP_002479617 |
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| Protein GI | 220904305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000591223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAA TTTTCAAGGC GTTTCCCCTA TCGTTCCGTC ATGCCTGCGG CTGTTTTCTG
GCTCTGTTTT TCCTTCTGTT TTCACTCCTC CCCGCATCTG CTGCCAATGG ATGGGACAAA
GACACGCTGG TGTACGCCTG GAGCAGCAAT GTGGGTCCCC TTAACCCACA CGCCTACGGC
GCCAACAAGA TGTTCGCCCA GGCCCTCATA TATGAGCCGC TGGTGCAATA TGCCGAAGGC
GGCAAGATCG TCCCCTGGCT GGCCGAAAGC TGGACAATCT CGCCCGATGG CAAGGTCTAC
ACTTTCAATC TGCGCAAAGA TGTAAAATTT TCAGACGGCA CTCCCTTTAC AGCCGATGCA
GTGGTAAAAA ACTTCGATGC CGTCCACATG AACATCAAGC GTCATGACTG GCTGGCCACG
GCTGACCTTA TCGATTCATA CAAGGCTGTC GGGCCTCATA CCTTTGAACT GGTACTCAAG
CAGCCGTATG CTGCAGCGCT TCAGGAACTG AGCCTGGTGC GCCCCCTGCG CTTTCTCTCC
CCCGCGGCCA TGCCCGAAGA CGGCAATACC GCCCAAAGCA TAAAAGCACC TGTGGGAACT
GGTCCCTGGG TTCTGGCCGA AAGCCGCAAA GGCGAATTTG ACCGCTTTGT GCGCAACGAT
AATTACTGGG GCGAAAAACC GCAGATGCGC CAGCTTGTGG TCAAGGTGAT TCCTGATGCA
GAAACCCGGG CTGTCGCGCT TGAAAGCGGT GAGGTGGACC TTATAGCCAC TGCCATTGCC
GACCACGGCT CGGCCGGAGT AAATCCGGAT GCTTACGCCG CCCTGTCCAA GGATCCGGCC
TACGCCACCC GCGAATCTTC TCCGCGCAAT ACCCGTCTGC TGGCTATGAA TACCGCCCTG
TTCCCGACCA ATGAGCTTGC TGTGCGTCAG GCCATTGTGC GCGCCATTGA TCGTCCTTCC
ATAATAAAGG GTGTGCTGCT CGGCCAGGAA GCTCCGGCCG AAGAACTGCT GGCTAAGGAC
ATTCCCTTCT GTGATGTCGC GCTGAAGCCT TATCCCCATT CTCTTGAAGA GGCCGCCGCC
ATTCTGGACA AGGCTGGCTG GAAGCTTAAA TCCGGCGAAA AATTCCGGAC CAGAGATGGC
AAAACCCTGC GCCTTGAACT TAAGTTCATT GCCAACGAAA GCATCATGCG CTCCATTGCC
GAAGTGGTGC AAAGCAACCT GGCCCGCATC GGCGTGGATG TTAAGCTGAT GGGCGAAGAG
CCTAACGCGT TCGGGGCGTC GCAGACCGAC GGCGCATTCA ACATGATATT CTGCGAATCC
AACGGTGCGC CCTATGATCC GTTCTCATAC GTTGCAGCCA TGCGCGTGGC CGGACATGCG
GACTACCAGG CCCAGCGCGG GCTGCCGCAG AAAAAAGAAC TGGATGCAGC CATTACAAAA
GCCCTTGCCA CAACGGACAC CAAGGAACTT CAGAACCTGT TCACCAGCAT TCTGACCATG
CTGCATGAAG AAGCCGTTTA CGTTCCCGTA AGCCGTACTA TTGACAAGGC ACTGTTCAAA
AAGAAAAACA TCAAGGATTT CGCCTTCAGC CCTGTCTCCT ACGAACTGCC TCTGGCGCGG
ATTTCAAGGC CATAG
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| Protein sequence | MNRIFKAFPL SFRHACGCFL ALFFLLFSLL PASAANGWDK DTLVYAWSSN VGPLNPHAYG
ANKMFAQALI YEPLVQYAEG GKIVPWLAES WTISPDGKVY TFNLRKDVKF SDGTPFTADA
VVKNFDAVHM NIKRHDWLAT ADLIDSYKAV GPHTFELVLK QPYAAALQEL SLVRPLRFLS
PAAMPEDGNT AQSIKAPVGT GPWVLAESRK GEFDRFVRND NYWGEKPQMR QLVVKVIPDA
ETRAVALESG EVDLIATAIA DHGSAGVNPD AYAALSKDPA YATRESSPRN TRLLAMNTAL
FPTNELAVRQ AIVRAIDRPS IIKGVLLGQE APAEELLAKD IPFCDVALKP YPHSLEEAAA
ILDKAGWKLK SGEKFRTRDG KTLRLELKFI ANESIMRSIA EVVQSNLARI GVDVKLMGEE
PNAFGASQTD GAFNMIFCES NGAPYDPFSY VAAMRVAGHA DYQAQRGLPQ KKELDAAITK
ALATTDTKEL QNLFTSILTM LHEEAVYVPV SRTIDKALFK KKNIKDFAFS PVSYELPLAR
ISRP
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