Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_1031 |
Symbol | |
ID | 7284712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 1206783 |
End bp | 1207721 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643581832 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002479616 |
Protein GI | 220904304 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0169288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGCT TTTTGTGCCG CCGCCTTCTT GTCCTGTCCC CTCTGCTGCT GGGAGTTTCT GTTTTTGTTT TTGCCGTCCT GCGCCACGGT AAAACAGATC CGGCAATGGC ATATCTGCGT TTGTCCGGTC TGCCGCCCAC TGAAAGCCTG CTGGCGACCA CCCGCGAAAG CCTGGGCCTG AACCAGCCGC TCTGGAAGCA GTATCTGGAC TGGCTGAGCT CGGCCCTGCA AGGCGACCTG GGCCTGTCCT ATGTCACAGG CAATCCGGCC CTCAACGAAA TCCTGTATTA TCTTCCCGCT ACCATTGAAC TGACCATGTG GGCTATGGCC GCCACAATTT TCATCAGCGT TCCCCTTGGT ATCGCGGCTG CTCTGTACAA AGACCGCTGG CCGGATCACC TTACCCGTAT TTTTGCGTTC AGTGCCGTAT CCATGCCCTC ATTCTGGCTG GGTTTTCTAC TGGTGCTCCT TTTTTCGCGC CATCTTGACA TTCTGCCAGC CATGGGCCGG GGCGGCCCGG AATTTCTGAT TTTGCCCGTG TTCACGCTTT CTTTCATGTC TATGGGGATC AACATACGCC TGGTGCGAGC CAGCATGCTG GAACACATGC ATAGCCGCAG CGTCATCTAT GCCCGCTCAA GAGGTTTGAA AAAATGGCGC ATCATAGGCC AGCATGTGCT GCGCAATGCT TTTATTCCCG TCCTGACATC CATGAGCATG CACTTCGGCG AACTGCTCGG CGGGGCTGTG ATTGTTGAAA ACATTTTCAA CTGGCCCGGT GTTGGCCGTT ATGTGGTTTC TGCCATCTAC AATCACGACT ACCCCGTGAT CCAGACGTTT ACACTGGTAA CCACCCTTAT TTTTGTGTTT GTCAACCTGC TTACTGATGT ACTTTACGCG CGCATCGACC CGCGCATCCG CCTTGGAGAA GGACGATGA
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Protein sequence | MIRFLCRRLL VLSPLLLGVS VFVFAVLRHG KTDPAMAYLR LSGLPPTESL LATTRESLGL NQPLWKQYLD WLSSALQGDL GLSYVTGNPA LNEILYYLPA TIELTMWAMA ATIFISVPLG IAAALYKDRW PDHLTRIFAF SAVSMPSFWL GFLLVLLFSR HLDILPAMGR GGPEFLILPV FTLSFMSMGI NIRLVRASML EHMHSRSVIY ARSRGLKKWR IIGQHVLRNA FIPVLTSMSM HFGELLGGAV IVENIFNWPG VGRYVVSAIY NHDYPVIQTF TLVTTLIFVF VNLLTDVLYA RIDPRIRLGE GR
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