| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1030 |
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| Symbol | nikC |
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| ID | 7284711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 1205974 |
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| End bp | 1206786 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643581831 |
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| Product | nickel transporter permease NikC |
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| Protein accession | YP_002479615 |
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| Protein GI | 220904303 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.503674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAA AAACGCTCGT AGCCCTTCTC ATGCTGCTGC CGCTGATGGC CTGCGCCCTG
CTGGGTCCCT GGCTGGCGCC CCACGACCCC GAAGCCGTGG AGCTGGCAAA AAAATTTCTG
CCTCCCGATG CGGACCATCT GCTGGGCACA GACCACCTGG GGCGCGACAT TCTCTCCCGC
CTCATGGTGG GGGCCCGCTA CTCCCTGTCC ACAGTGCTGT ACATCATCGC CTGTATCGTG
GCGGCAAGCC TCGCCCTTGG CTCCGTGGCA GGCTATCTCG GCGGCAGGGC AGATTCCGCC
ATCATGCGCG TCTGCGATGC CATGATGACC TTTCCAACCA TAGTATTGGC GCTTTTTCTT
ATCGGCATTC TCGGGGCCGG GCTGACAAAC CTTGTCATCG CCATCGCTGT AACCCATGTG
GCATGGTACA CACGGCTCGT GCGCAGTCAT GTACTGAGCC TGAAAAGCCG GGGGCATATC
CTGGCAGCGC AGGCCATGGG CCTGAGCCGC ACACGCATTG TCATCCGCCA TTTCCTGCCC
GCGATTATTG TGCAGGTTCT GGTACTTGCA ACGCTGGATG TGGGACATAT GCTTCTGCAT
GTGGCCGGGC TTTCCTTTCT GGGGCTGGGC ATACAGCCCC CCACACCGGA GTGGGGACTC
ATGATCTCCG AAGCCCGCAA CTACATACGC TCGCAACCCA TGCTCATGTT CTATCCCGGC
ATGATGATCT TCATGGCTAC TGCCGCCTGC AACCTTATGG GCGATGCGCT GCGGGACCGC
CTGGACCCTG CCCTGCGCGC CGCGGGGGCC TGA
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| Protein sequence | MNKKTLVALL MLLPLMACAL LGPWLAPHDP EAVELAKKFL PPDADHLLGT DHLGRDILSR
LMVGARYSLS TVLYIIACIV AASLALGSVA GYLGGRADSA IMRVCDAMMT FPTIVLALFL
IGILGAGLTN LVIAIAVTHV AWYTRLVRSH VLSLKSRGHI LAAQAMGLSR TRIVIRHFLP
AIIVQVLVLA TLDVGHMLLH VAGLSFLGLG IQPPTPEWGL MISEARNYIR SQPMLMFYPG
MMIFMATAAC NLMGDALRDR LDPALRAAGA
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