Gene Ddes_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0952 
Symbol 
ID7284632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1109492 
End bp1110982 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content62% 
IMG OID643581752 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_002479537 
Protein GI220904225 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAG CCATACTGAC CGTCCGTGAA CTTACGGAAC AACTACGCAA AAGCCTTGAA 
GGGCGTTTTC CCTTTGTCTG GGTACGGGGT GAGGTGACCA ACTTCTCACG CCCCGGCTCG
GGACATGTCT ATTTCAGTCT CAAAGACCAG GATGCGCAGT TGCAGTGTGT CTGGTTCCGG
CACATGCAGC GGCAGGCAGA CCAGGGGTTT GATCCGCTTA CAGGGGAAGT TTTTGACGAG
CCGCGACCTT CTCCTCTTGA GCTTTTGCGC AATGGGCTGG ATGTGCTTTG CGCCGGGCGC
ATCAGCGTAT ATGCGCCGCG CGGGCAGTAT CAGCTTGCAG TGGAACTGGT GCAGCCCGCA
GGCGAAGGGC TGCTTGCGCA GGCTTTTGAA GAAAGCAAGC GCAAGCTGGC CGCCCTGGGG
TATTTTGACC ACGGGCGCAA ACGCCCTTTG CCCAGGGACC CGCAGCGAGT GGCTCTTGTT
ACTTCGCCCA CCGGGGCGGC CATTCACGAT TTTCTTGAAC TGGCGCGCGA CCGCGGCAGC
GGTTCGTGCA TCCGCCTTTT CCCGTCGCTG GTGCAGGGGG CGGAGGCGGC TCCGGCCATT
GTGCGCGCTC TGGCCGAAGC CAATAGCCAG GCCGGGCAGA ATGACGGGCC GCAGGTCATC
GTTCTTGTGC GCGGCGGCGG TTCGCTGGAA GATTTGTGGG CCTTTAACGA AGAAAGCGTG
GCAAAAGCCG TCTTTGAATC CCGGCTGCCT GTTCTTGCGG GCATCGGTCA TGAAGTGGAC
ATGACACTGG CGGACATGAC CGCCGATATG CGCGCCGCCA CGCCGAGCCA TGCGGCCCAG
TTGCTCTGGC CACCGCGCCT TGAGTTGCAC CAGCGGGTGG ACGAGGCCCG GGCGGCCCTG
CGGCGCGCTA TGGAGCGACG CCTCGAATCT GCCGGGCAGC GGCTGCGTGA ATACGAAAAA
GCACTGGCCT GGTTTTCGCC ACAGCGGCAC CACGAGCGTC TGTACGAGCG CCTGGCTGTT
CTGGACGCTG CGCTTGCCAG GGCCGCGCGG CACTGGCTGG AAAGTAGGGA AGCGCAGACA
GTCCGGCTCG AATGTGCTTT GCGTGGCTCT TTCGGCCTGG AAAAACTCGA TATTTTTGAT
GCCCGTCTGA AACACCTGCA TGCGCGTCTG CATGCGGCTC TGCCGCGTCT GACGGACGAG
CGGCAGCGTG CCCTGAATTA TGCCGCCCTG CGCCTGCAAA GCGCAGCCAG AAACCATGTG
GCGCAGCACG AACGTAGCCT GGATGTTCTT GGGGCGGCCC TTGATGCGGG CGATCCCCTC
ATGCCGCTTT CTCGCGGTTA TGCTTTGGTA AGCGCCGGCG GCAGCCTTGT GCGCTCTGTG
GAAACAGCGC CCCCCGGTAC GGAAATTCAG GTGCGCCTGG CTGACGGCAG CCTGGCAGCC
GTGGTCGGCA GCGTGAACCA CGCCGGACGC GGAAAAAGGA AAAAAACGTG A
 
Protein sequence
MQEAILTVRE LTEQLRKSLE GRFPFVWVRG EVTNFSRPGS GHVYFSLKDQ DAQLQCVWFR 
HMQRQADQGF DPLTGEVFDE PRPSPLELLR NGLDVLCAGR ISVYAPRGQY QLAVELVQPA
GEGLLAQAFE ESKRKLAALG YFDHGRKRPL PRDPQRVALV TSPTGAAIHD FLELARDRGS
GSCIRLFPSL VQGAEAAPAI VRALAEANSQ AGQNDGPQVI VLVRGGGSLE DLWAFNEESV
AKAVFESRLP VLAGIGHEVD MTLADMTADM RAATPSHAAQ LLWPPRLELH QRVDEARAAL
RRAMERRLES AGQRLREYEK ALAWFSPQRH HERLYERLAV LDAALARAAR HWLESREAQT
VRLECALRGS FGLEKLDIFD ARLKHLHARL HAALPRLTDE RQRALNYAAL RLQSAARNHV
AQHERSLDVL GAALDAGDPL MPLSRGYALV SAGGSLVRSV ETAPPGTEIQ VRLADGSLAA
VVGSVNHAGR GKRKKT