Gene Ddes_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0930 
Symbol 
ID7284609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1086395 
End bp1087504 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content55% 
IMG OID643581729 
Producthypothetical protein 
Protein accessionYP_002479515 
Protein GI220904203 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0225684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACA AAGGATTATT GGGTAAAATT GTGGCCATTA TCCCCGGTTT GGTGCTGATG 
ATCGGCACCC TGGCCGTATT GCGCATGTAT GCTGTTCCCT GGCTGAACGG CATCACGCTT 
TTCGGCGTAA AAGGCTGGCC TGTAAAAGTG CTGAGCCTCA ACTATATCTT GCTTTCCATT 
ATTGCGGGCA TGCTGTTTCG CAACGTTTTG TTTGGCGGCA AGATTCCCGC GTGGGCGGAT 
GCGGGCTTTC GCACAACCCG CCTGTTTATT AAAACGGGCG TTATCATGCT GGGTTCGCTG 
TATACCCTGC AAAGTCTGCT CAAACTGGGT ATAAGCGCCG CGCTGCTGAT TATGGCTTTT 
GTGTTCGGCA CTGTCTTCCT TATCATGTGG TTGAGTAAAA TATGGAAAGT TGACCGCTCT 
GTGGCGGCTG TTATGGCGGC GGCCTGCGGC GTGTGCGGGG TTTCTGCGGC GGTGGCGGCA 
GCCCCCGGTG TGCGCGCCCG TCCTGTGGAC CTGGCCCTTG CCATTGCCAC GATTCTTGGC 
TTTGGCATTG TGACGATGTT TATCAGCCCC TTTATCGGTA AAGCGCTCAA CCTGTCAGAC 
CTGCAATACG GCGCATGGGT CGGTACGGGC ATTCTGAACT CCGGCCAGGT GCTTGCCACC 
TGCCTGGCAT TCAATCCGGT AATTGCTCCG GGAACGGCCG TGGCCTATGG TGAAGTGTGG 
AACGTGGTGC GCGTCATCAG CATTCCTTTT GTGGTTTTTG CCATCACCGT CTGGTACTGG 
AAGGGAGAGG GAGAGGCCGA GCACATCAGC CTGAAGGAAA TTCTTATTTC CAAGTTCCCC 
ATCTTCGTTT TGGGCTTCTT TGGCATGACG GCCCTGTCTT CTCTGGGTAT GCTCGGGGCT 
GAAGGTTCTG AAACCCTGCA CCTTCTGCGC GACTGCATGC AATGGATATT CGGCATCGGC 
CTTGTTGGGC AGGGGGCGTA CATTGACTTC CGTGAAATCA AGGCCGCCGG CGGCAAGCCG 
TTGCGCCTCG GTCTGACCGC GGGTACCGTA AAATATGTGC TGGCCCTTAT CGTCATCATG 
CTGTTCATGC CCAAAGTAGG CGCGTTCTAA
 
Protein sequence
MEDKGLLGKI VAIIPGLVLM IGTLAVLRMY AVPWLNGITL FGVKGWPVKV LSLNYILLSI 
IAGMLFRNVL FGGKIPAWAD AGFRTTRLFI KTGVIMLGSL YTLQSLLKLG ISAALLIMAF 
VFGTVFLIMW LSKIWKVDRS VAAVMAAACG VCGVSAAVAA APGVRARPVD LALAIATILG 
FGIVTMFISP FIGKALNLSD LQYGAWVGTG ILNSGQVLAT CLAFNPVIAP GTAVAYGEVW 
NVVRVISIPF VVFAITVWYW KGEGEAEHIS LKEILISKFP IFVLGFFGMT ALSSLGMLGA 
EGSETLHLLR DCMQWIFGIG LVGQGAYIDF REIKAAGGKP LRLGLTAGTV KYVLALIVIM 
LFMPKVGAF